Nitrosomonas sp. AL212: NAL212_1370
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Entry
NAL212_1370 CDS
T01443
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03420
Nucleotide excision repair
nit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAL212_1370
03430 Mismatch repair
NAL212_1370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nit03400
]
NAL212_1370
Enzymes [BR:
nit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAL212_1370
DNA repair and recombination proteins [BR:
nit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAL212_1370
MMR (mismatch excision repair)
Other MMR factors
NAL212_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_22
AAA_11
DUF3553
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADZ26266
UniProt:
F9ZHW8
LinkDB
All DBs
Position
1286894..1289110
Genome browser
AA seq
738 aa
AA seq
DB search
MTSLLSDLNPQQLEAITLPHQSVLVLAGAGSGKTRVLTTRIAYLIQSGQVSPSGILAVTF
TNKAAKEMLARITAMLPINPRGMWIGTFHGLCHRMLRSHYQDAGLPQAFQILDSADQLAL
IKRILKDLSADDKKFPPRQVQWFINNAKESGLRAAYVTPDDVFSRHMLEFYQAYEQRCHK
EGAVDFAELLLRSYELLSRNEILCQHYRERFNHILVDEFQDTNPLQYKWLKLLAGTGTKE
TAVVFAVGDDDQSIYAFRGAYSGNMRDFERDFGITKIIKLEQNYRSHGNILDAANALIEN
NSERLGKNLWTAEGRGEPLRVYNAPNDFDEAAFIVEEVKTLHAEEGIALSEIALLYRSNA
QSRVLEHSLFNAAIPYRVYGGMRFFDRQEIKHALAYLRLIANPDDDGALLRVINFPARGI
GARSLEQLQDDAKAQGHSLWAAALQKCGGEVSLLQESHKSLKGVAKFVFLIMTMRQSCGE
LLLPQIVEYMLIHSELLVHYAKERESSERLENLNELINAATSFVHEIGNDSLTEFLAHAS
LEAGEHQAGSGRDALQLMTVHAAKGLEFHTVFLSGLEEGLFPHENSLNESNGIAEERRLM
YVAMTRARRRLYLSFTQSRMLHGQTRYNIASRFLDEIPQACLKWLQAAPRNPDTFFRYSN
GTNQTSVDASRNSSGIHSRYFNSGIGGWKIGQSVMHAKFGVGVIINCEGCGSDARVQVNF
DHAGMKWLSLEYAKLTTV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttattatccgatctgaatccgcagcaactggaagcgattacattgccacac
cagtctgtgttggttttagctggtgccggtagcggtaagacacgtgtattgacgacgcgc
attgcatatctgatccaatcggggcaagtaagtccgagcggtattctggctgttacattt
accaacaaagcagctaaggagatgctggcgcggattaccgctatgctgccgattaatccg
cgcggaatgtggattgggacatttcatggattgtgtcaccgcatgttgcgctcgcattat
caagatgccggtttgccacaagcgtttcagatcctggattctgcggatcaattggcttta
attaaacgtatcttgaaagatttatccgctgacgacaagaaattcccgccccgtcaagtt
cagtggtttatcaacaacgccaaggaatctggtttacgtgccgcttatgttacgcccgat
gatgttttctcacgccatatgctcgaattttatcaagcatatgagcagcgatgtcataaa
gagggtgccgtggatttcgccgaattgttgttacgcagttatgaattgctgagccgcaat
gaaatcttatgtcagcattaccgggaacgttttaatcatattctggtggatgaatttcag
gatactaatccactgcaatacaaatggctcaaattgctggcgggtacaggaacgaaggaa
acggcggtggtttttgcggtcggtgatgatgaccaaagcatttatgcgttccgtggtgca
tacagcggcaacatgagagactttgagcgcgactttggcatcacaaaaataatcaagctg
gagcagaattatcgatcccatgggaatattctggatgcagctaatgcattaattgaaaat
aatagcgagcgtttgggtaaaaatctttggactgctgagggaaggggcgagccattacgt
gtttacaacgcgccaaatgatttcgatgaagcggcatttattgttgaagaagttaaaact
ttgcatgcggaggagggtatcgccttatcagaaattgcgttgctatatcgctccaatgca
caatcacgagtgcttgaacacagcttgttcaatgctgcaataccttatcgtgtctatggg
ggtatgcgattctttgatcgtcaggaaatcaaacacgcattagcttatttacgcttaatt
gccaatcctgatgatgatggcgctttattgcgtgtcatcaactttccggcacgtggtata
ggagctcgtagcttggaacaattgcaagatgatgccaaagctcaaggtcacagcctgtgg
gcggcagcattgcaaaaatgtggcggtgaagtgtcattgttgcaagaatcgcacaaatcc
ttaaaaggtgtagccaagtttgtatttctgatcatgacgatgcgtcaaagctgtggcgag
ttactgttgcctcaaattgtagagtacatgctgattcatagtgagctattggtgcattat
gccaaagagcgcgaaagttcggaaaggctcgaaaatttgaatgagctaattaacgctgcg
accagttttgtgcatgaaatcggaaatgacagtctgacagagtttcttgctcacgcttca
ctggaagctggtgagcatcaggccggcagcggtcgggatgcattgcaattgatgacagtt
catgcagctaaaggattggagtttcatactgtgtttctgagcggattggaggaggggctt
ttcccgcatgagaacagtttgaatgaaagcaatggcatcgctgaggaaaggcgcttgatg
tacgtggccatgacacgcgctcgccgccggttatatctgagttttacgcaaagccgaatg
ctacatggccaaactcgatataacattgcgtcacgctttctcgatgaaattccacaagct
tgcttaaaatggctgcaagctgcaccgagaaatccggatacctttttccgctactcgaat
gggactaatcaaacctctgtggatgcatcaagaaattcgtcaggtatccactctagatat
ttcaacagtggtattggtggatggaaaatcggacagagcgtgatgcatgccaaattcggt
gtcggtgttattatcaattgtgaaggttgcggcagcgatgcgagggttcaggtaaatttt
gatcacgctggaatgaaatggttgtcgcttgaatatgcaaaattgaccacagtttaa
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