Nitratireductor mangrovi: FQ775_06635
Help
Entry
FQ775_06635 CDS
T06518
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
niy
Nitratireductor mangrovi
Brite
KEGG Orthology (KO) [BR:
niy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
niy03016
]
FQ775_06635 (thpR)
Enzymes [BR:
niy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FQ775_06635 (thpR)
Transfer RNA biogenesis [BR:
niy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FQ775_06635 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QDZ00082
UniProt:
A0A5B8KWZ4
LinkDB
All DBs
Position
complement(3661759..3662355)
Genome browser
AA seq
198 aa
AA seq
DB search
MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHITLRFIGDVEGRVADDIANGLDR
VRRPAFQIHLSGVGTFGSKKPHALWAGVAPSSELFGLQSEIDRICLRHGAAADPRKFTPH
VTLARLRNAASHELAAYLSGRGNFATAPFKVARFVLMSSRESVGGGPYVVEEAWPLSAAG
HASTSLPASASDAMRIMR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacttttcaccgccctcgagataccgcgcgatgccgcactctcgctctccctg
ctccgcggcggcctgcccggagcgcgctggatcgatgtcgagaactaccacatcaccttg
cgcttcatcggcgatgtcgagggccgcgtcgccgacgacatcgccaacggactcgaccgg
gtgcggcgcccggccttccagatacacctctccggggtcggcaccttcggcagcaagaag
ccacatgccctctgggccggggtggcgccgtcctccgaacttttcggtctgcagagcgag
atcgatcgtatctgcctgcgccacggggcggcggccgacccgcgcaaattcacgccgcac
gtcacgctggcgcggctgcgcaacgccgcatcgcatgaactcgccgcctacctgtccgga
cgcggcaatttcgccaccgcaccgttcaaggtagcccgcttcgtgctgatgtcgtcacgc
gaatcggtgggtggcggcccctatgtcgtggaagaggcgtggccgctgtccgcagccggt
catgcgtcgacgagcctgccggccagcgcttccgacgcgatgcggatcatgcggtag
DBGET
integrated database retrieval system