Neptunomonas japonica: NEJAP_0002
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Entry
NEJAP_0002 CDS
T07060
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
njp
Neptunomonas japonica
Pathway
njp03030
DNA replication
njp03430
Mismatch repair
njp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
njp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEJAP_0002 (dnaN)
03430 Mismatch repair
NEJAP_0002 (dnaN)
03440 Homologous recombination
NEJAP_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
njp03032
]
NEJAP_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
njp03400
]
NEJAP_0002 (dnaN)
Enzymes [BR:
njp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEJAP_0002 (dnaN)
DNA replication proteins [BR:
njp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEJAP_0002 (dnaN)
DNA repair and recombination proteins [BR:
njp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEJAP_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BBB27961
UniProt:
A0A7R6SU54
LinkDB
All DBs
Position
1841..2944
Genome browser
AA seq
367 aa
AA seq
DB search
MKFVISREALIKPLQLVAGVVERRQTLPVLSNILLVAEDHKLSMTGTDLEVELVGCVMLD
EPAEPGSITVPARKLMDICKSLSDDAQIEMTLTGQKMIIKSGRSRFTLSTLPAVEFPNVE
DSPQTFDLTLSQGQLRYLIEQTGFSMAQQDVRYYLNGMLLEIADGSLRTVATDGHRLATS
VASVETDQQTAQQIIVPRKGILELARLLQHGDEPLKLVVGANHIRAHVGDFIFTSKLVDG
KFPDYQRVIPRNGDKYVLGDRQALRKVFSRIAILSNEKYRGVRLTLTSGFLQVMANNPEQ
EEAEETIAIDYEGDSLEIGFNVNYLLDALSILNSDVVRFTLSDSNSSALIEGYDEEGNLY
VVMPMRM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgttatttcacgtgaagcactaattaaaccgctgcaattggtagcgggtgtg
gtggagcgtcgtcagacacttccagtgttgtccaatattttattggttgctgaagatcat
aaactgtcgatgacagggaccgatcttgaagttgagctggttggttgtgtgatgcttgat
gaacccgcagagccgggttctatcaccgtgccagcgcgtaagcttatggatatttgtaaa
tcactttctgatgatgcacagattgaaatgacgcttactggccaaaaaatgattattaaa
tctggtcgcagtcgctttacgctgtctaccttgccagctgttgagtttccaaatgttgaa
gatagcccgcaaacatttgacctgactttgtcacaaggacaattgcgttacctgattgag
caaacgggtttctcgatggctcaacaggatgttcgttactacctaaatggtatgctcttg
gagattgctgacggctcattacgtacggtagctactgatgggcaccgtttggcaacgagc
gttgctagtgttgaaacggatcaacaaacggctcaacagattattgttcctcgtaaaggg
attctagaattggcgcgtttgcttcaacatggcgatgagccgcttaagttagtcgtgggt
gctaatcatattcgtgctcatgtaggtgattttatcttcacctctaagttagttgatggg
aagttcccagactaccagcgtgttattcctcgtaacggggataaatacgtattgggtgat
cgccaagccttgcgtaaagtgtttagtcgtatcgcgattctctcaaacgagaagtaccgt
ggtgttcgtttgacgttgaccagtggcttcttgcaagtaatggccaataacccagagcaa
gaggaagcagaagaaactatcgctatcgattatgaaggtgactctcttgagatcggcttc
aatgttaattacttgcttgacgcgctatctatcctaaattctgatgtggttcgttttacc
ctgtctgattctaatagcagtgcattaatcgaaggctatgatgaagagggtaacctctac
gttgtcatgccgatgagaatgtaa
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