Candidatus Nitrosopumilus koreensis: NKOR_01585
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Entry
NKOR_01585 CDS
T02304
Name
(GenBank) RNA polymerase Rpb5
KO
K03053
DNA-directed RNA polymerase subunit H [EC:
2.7.7.6
]
Organism
nkr
Candidatus Nitrosopumilus koreensis
Pathway
nkr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nkr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NKOR_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nkr03021
]
NKOR_01585
Enzymes [BR:
nkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NKOR_01585
Transcription machinery [BR:
nkr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NKOR_01585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb5_C
Motif
Other DBs
NCBI-ProteinID:
AFS80223
UniProt:
K0B2G7
LinkDB
All DBs
Position
274332..274583
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AA seq
83 aa
AA seq
DB search
MATKKNQILVPDHIYVPKHEIISKQEAEEVLKKYNCKPTELPLIFVNDPAILGLGVKPGD
MIKITRKSPTAGESLYYRYVVEV
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
ttggcaactaagaaaaatcaaatcctcgtacctgatcacatctatgtcccaaaacatgaa
atcatttcaaaacaagaagctgaagaagttttaaaaaaatataattgcaaaccaaccgaa
ttaccattaatctttgtaaacgatcctgccattttgggactaggtgtaaagccaggtgat
atgataaagatcactagaaaaagtccaacagcaggtgagagtctctattatagatacgtg
gtggaagtatag
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