Nitrosospira lacus: EBAPG3_006195
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Entry
EBAPG3_006195 CDS
T04907
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EBAPG3_006195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nlc03021
]
EBAPG3_006195
03400 DNA repair and recombination proteins [BR:
nlc03400
]
EBAPG3_006195
Enzymes [BR:
nlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EBAPG3_006195
Transcription machinery [BR:
nlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EBAPG3_006195
DNA repair and recombination proteins [BR:
nlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EBAPG3_006195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ARO87395
UniProt:
A0A1W6SNL6
LinkDB
All DBs
Position
1396330..1397334
Genome browser
AA seq
334 aa
AA seq
DB search
MPSNIFLTPRIIDVQNFSPLHAKVTMEPFERGYGHTLGNALRRILLSSMPGFAPTEVQIS
GVVHEYSALDGVQEDVVDILLNLKGIVLKLHNRTEAVLILKKKGEGTVTAGDIEAGHDVE
IINPDHVVAHLTAGGKLDMQIKVELGRGYVPGTVRQQANEGRTIGSILLDASFSPVRRVS
YAVESARVEQRTDLDKLVMDIETNGVVDPEEAIRYAAKVLVEQLSVFADLKGTPLPVEQP
KLPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLESWPPANLEKSKKETSHATP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtaacatttttcttacgccacgcattattgacgtgcagaatttttcgccgttg
catgccaaagtcaccatggaaccgttcgaacgtggctatggacatactttaggaaacgcg
ttacgccgtatcttgctatcatccatgccgggatttgcgccgaccgaggttcagatcagc
ggagtggtgcatgaatattccgctctcgatggagtgcaggaggatgtggtcgatatcctg
ctcaatctgaaaggtattgttctgaagctgcataaccgcaccgaagccgttctgattctg
aaaaagaagggtgaagggactgttactgcgggcgatatcgaggccgggcatgacgtggag
atcattaatccggaccatgtcgtcgcacatctcaccgccggcggaaaattggatatgcag
atcaaggtggagctcgggcgcggctacgtgccgggaacggtgcggcaacaggcaaatgag
ggccgtaccatcggcagcattttgctggatgcttccttcagtccggtaagacgtgttagt
tacgcagtggagagcgcgcgtgtcgaacagcgtaccgacctcgacaagcttgtcatggat
attgagacaaatggcgtggtcgatccggaagaggcgattcgatatgccgcgaaagtgctg
gttgaacagctttccgtatttgccgatctcaaaggcacgccattgccggtcgagcagccc
aagctgccgcagattgatccggtattgctacgcccggtggatgatctggagcttactgta
cgctctgccaactgtcttaaggccgagaatatttactacattggcgacttgattcaacgc
acggagaccgaattgctgaagactcctaatttaggcagaaaatctctcaatgaaatcaag
gaagtacttgcttcgcgcgggctaacattgggaatgaagctggagagctggcctcccgcc
aatcttgagaaaagcaaaaaggaaacaagtcatgcgacaccataa
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