Nitrosospira lacus: EBAPG3_013085
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Entry
EBAPG3_013085 CDS
T04907
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nlc
Nitrosospira lacus
Pathway
nlc00100
Steroid biosynthesis
nlc00909
Sesquiterpenoid and triterpenoid biosynthesis
nlc01100
Metabolic pathways
nlc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
EBAPG3_013085
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
EBAPG3_013085
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nlc01006
]
EBAPG3_013085
Enzymes [BR:
nlc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
EBAPG3_013085
Prenyltransferases [BR:
nlc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
EBAPG3_013085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ARO88627
UniProt:
A0A1W6SS56
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All DBs
Position
2870390..2871430
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AA seq
346 aa
AA seq
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MSSDPTTHELLHGILKQVSRSFYLTLNVLPAGVRDQMGLSYLFARAADTIADTDLIDRGQ
RLKYLNQFRAQFRSAEIDWQAIQEIQAALIPHQKDSAESILLQRLEDCLKLYKTYSTGDQ
ERIQWLMDVLPNGMEMDLTRFPGESAGQLTALSTLDELDQYTYYVAGCVGEFWTRMVCAH
SPEMARWDVTEMSVMGVRFGKGLQLTNIVKDIARDLRNGRCYVPEPLLQEAGLQPADLLN
EDSLPKFRPVLNRLIRLAVEHLNEGWKYTMAIPASEIRQRLACMWPILLAGETLKRVAIA
PGLLNPAVNVKAPRSTVYRVMAITILTGANESVATACWNRVREHIV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcgatcccaccacacacgagcttctgcatggcattctcaagcaggtttcccgg
tcgttttatctcacgcttaacgtgttgccggcgggggtacgcgatcagatgggattatcg
tatctgtttgcccgcgcagccgacaccatcgccgatacggatcttatcgaccgcgggcag
cgcctgaaatacctgaatcagtttcgtgcgcagtttcgaagcgctgaaattgattggcag
gccatccaggagatccaagccgcgctcattcctcatcagaaagactccgccgaaagcatc
cttctccagcggctggaagactgcttgaagttatataagacatattctactggcgaccaa
gagcgtatccaatggctgatggacgtgctgcccaacggaatggaaatggatctgacccgg
tttcccggcgagtcagccgggcagcttaccgcattatccactctggacgaactggatcag
tacacttactatgtcgcgggctgtgtcggagaattctggaccagaatggtttgcgcgcac
agcccggaaatggcccggtgggatgtcacggaaatgtccgtcatgggcgtgcgattcgga
aaaggacttcagcttaccaatattgtgaaggacattgcccgcgacctgcgtaatggccgc
tgctatgtgccggagccactcctgcaggaagctggattacagcctgccgatttgctgaac
gaagacagtctgccgaaattcagacccgtcttgaatcggctcatccggcttgccgtggag
catctaaacgaaggctggaaatataccatggcgattcctgcctccgagattcgccagcga
ttggcctgcatgtggccaatattattggccggggaaacgttgaaacgcgtcgccatagcg
cctggcttacttaatccggccgtcaatgtgaaggcacctcggagtactgtgtatcgtgta
atggcgataacgattctgaccggcgctaacgaatccgtggcaaccgcctgctggaaccgt
gtcagggaacacattgtctga
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