Nomascus leucogenys (northern white-cheeked gibbon): 100589604
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Entry
100589604 CDS
T03265
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X4
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100589604 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100589604 (CNOT1)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100589604 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100589604 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
100589604
NCBI-ProteinID:
XP_003263163
Ensembl:
ENSNLEG00000003566
LinkDB
All DBs
Position
2:61632583..61742657
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASVEECRNIIVQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaattaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcgttg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgctccccacttatttgcccagctgagtaaagtgctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttccagctcagat
cttagaggtttcgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacaa
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaagaacgctgtccc
gtggtgctcgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctcgttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtgttgaagaatgtcgcaatataattgtgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggcattccattacagagtatttctgctccgggcagtgggatc
tggagtgatgggaaagataaaagtgatggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttcttaaagaactgaatccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtttgggtatggaagtgttcccagtagacctcatatatagaccttggaaa
catgctgaaggccagctctccttcattcaacattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggttgggcagtatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaattaacacctcttggcataccttgcgccat
gaacttatctccactctgatgccaattttccttggaaaccatcctaactcagcaattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgataaatgg
ctcacagataaaattcgagagcatggggagccttttatccaggcgtgtatgactttttta
aagagacggtgtccttctattttgggtggacttgccccagaaaaagaccagcccaaaagt
gctcaacttcctccagaaactttggcaacaatgttggcctgtctgcaagcttgtgcaggg
agtgtttctcaggagctatcggaaactatcctcaccatggtagccaattgcagtaatgtt
atgaataaggccagacaaccaccacctggagttatgccaaaaggacgtcctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatgacatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaaccccc
aatcagaccactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggtgctcttggactccctgcagtgaat
aacgacccttttgtacagaggaaactgggcacctctggactgaatcagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaaccagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagcgaatatataatcatccacca
catccaaccatgtctgttgatgaggtattagaaatgctgcagagatttaaagactctact
ataaagagggaacgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcgt
ttttttccccagtatcctgataaagagttacatataacagcctgcctgtttggtggtata
attgagaaaggactggtcacttacatggcactaggtctggctctacgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaacagattgaaggactatccccagtattgtcagcatttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcaaggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgccggtcaagttagcactatggta
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgtg
gccacagatcaaactgagagaattgtggaacccccagaaaatatccaggagaaaattgct
tttattttcaataatctctcacagtcaaatatgacacaaaaggttgaagagctaaaggaa
acggtcaaagaagaatttatgccttgggtttcacagtatctggttatgaagagagtcagt
attgagccaaactttcatagcctgtattcaaactttcttgatacgctgaagaatcctgaa
tttaacaagatggttctgaatgagacctacagaaacattaaagtgctcctgacctctgat
aaagctgcggccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgatcacattagctaaaaacaaacccatcttacacactgacttggatgtgaaatcattg
ctgctagaggcttacgttaaaggacaacaagaattgctctatgtagtgccgtttgttgcc
aaagtcttagaatctagcattcgtagtgtggtttttaggccaccaaacccttggacaatg
gcaattatgaatgtattagctgagctacatcaggagcatgacttaaagttaaacttgaag
tttgaaattgaggttctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctgaagaatttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctaccaca
ccagctaccaacaccacttgtacagccacggttccaccacagccacagtacagctaccat
gacatcaatgtctattcccttgcgggcttggcaccacacattactctaaatccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgtcaggcaattgaacgggct
gtccaggagctggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgccctggattcggaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacatgcagggaacct
ttgctcatgagcatatctaccaacctaaaaaacagttttgcctcagcccttcgtactgct
tccccacaacaaagggaaatgatggatcaggcagctgctcaattagctcaggacaattgt
gagttggcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaaggacgcagatac
tgtgatcctgttgttttaacatatcaagccgaacggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagttggctgtttatgaagagtttgcacgcaatgttcct
ggcttcttgcctacaaatgacttaagtcagcccacaggatttttagcccagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggag
cagcatctacatgccatcccaccaacgttggccatgaaccctcaagctcaggctcttcga
agtctcttggaggttgtagttttatctcgaaactctcgggatgccatagctgctcttgga
ttgctccaaaaggctgtagagggcttactagatgccacaagtggtgctgatgctgacctt
ctgctgcgctacagggaatgccacctcttggtcctaaaagctctgcaggatggccgggca
tatgggtctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggctgtggagctgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagcgcagtcaatggagaatggcttaaactacatggctgtggca
tttgctatgcagttggtaaaaatcctgctggtggatgaaaggagtgttgctcacgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaatgctcattccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagctatg
attgatcgtgctcatggaggcccaaactttatgatgcattctgggatctctcaagcctca
gagtatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcaccagcaaggaatactgaaaaccgatgatctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgcacaggcagagcagcagcacaat
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggatgcctttgtt
cgactcattgcactgctcgtgaaacactcaggggaggccaccaacactgtcacaaagatt
aatctgctgaacaaggtccttggtatagtagtgggagttctccttcaggatcatgatgtt
cgtcagagtgaatttcagcagcttccctaccatcgaatttttatcatgcttctcttggaa
ctcaatgcacctgaacatgtgttggaaaccattaatttccagacacttacagctttctgc
aatacattccacatcttgaggcctaccaaagctcctggctttgtatatgcctggcttgaa
ctgatttcccatcggatatttattgcaagaatgctggcacatacgccacagcagaagggg
tggcctatgtatgcacagctactgattgatttattcaaatatttagcgcctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagagtgctgctg
gttcttttgcatgatttcccagagttcctttgtgattaccattatgggttctgtgatgtg
atcccacctaattgtatccagttaagaaatttgatcctgagtgcctttccaagaaacatg
aggctccccgacccattcactcctaatctaaaggtggacatgttgagtgaaattaacatt
gctccccggattctcaccaatttcactggagtaatgccacctcagttcaaaaaggatttg
gattcctatcttaaaactcgatcaccagtcacttttctgtctgatctgcgcagcaaccta
caggtatccaatgaacctgggaatcgctacaacctccagctcatcaatgcactggtgctc
tatgtcgggactcaggccattgcgcacatccacaacaagggcagcacaccttcaatgagc
accatcactcactcagcacacatggatatcttccagaatttggctgtggacttggacact
gagggtcgctatctctttttgaatgcaattgcaaatcagctccggtacccaaatagccac
actcactacttcagttgcaccatgctgtacctttttgcagaggccaatacggaagccatc
caagaacagataacaagagttctcttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaacccagcatttaagttctggaaccat
gaatttgtacactgtgccccagaaatcgaaaagttattccagtcggtcgcacagtgctgc
atgggacagaagcaggcccagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
