Neodiprion lecontei (redheaded pine sawfly): 107223501
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Entry
107223501 CDS
T09006
Name
(RefSeq) PAX3- and PAX7-binding protein 1 isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
nlo
Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:
nlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nlo03041
]
107223501
Spliceosome [BR:
nlo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107223501
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
NTR2
Motif
Other DBs
NCBI-GeneID:
107223501
NCBI-ProteinID:
XP_015518672
UniProt:
A0A6J0BWQ5
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Position
7:23950082..23956016
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AA seq
828 aa
AA seq
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MSLFNKPKRNIRRRPFNEDDEDNENRMDSNEDSQSSKLKPKKKDKPKQTLLSFGEELDEA
DDGEVFKVKKSSRSKKLMKQLDHERKKKKGEEKMQVDSEQANMSVKQEKDLEIKTDDLVV
KIKNTNPLILNGRAALVAGKDDYTSEEEEDDASNHKFRKNTDRADTMKILLESGCIPDAA
MIHAARKRRQKARELGGEFIPIEEQREEKGKSRLVREEDHDRSDDEDSQDRIDMTVNTDA
RDKEKRREAFFASQLREKCTVSDNESEHGNEEEEWEAQQIRKGVTGAQIAAAQQDSMLQQ
QYSMGINVGQIIAPGLPLEMAMMPAPPPPPSLHPPDPTKIVPVTPQEVANKMRGRLESLR
EVCRRHLLDRDRVIEELIQTHKELEEGEARAPQLAQRFRYYQELRGYVTDLVECLDEKLP
LVIGLESRWLDLYGERSAELMERRRQDTRDQAEEITSASRSQGTLRRGVEDETRIRRATE
REGRRARRRRARELASTLPKHIDGMSSDDEVTEQQNLAFKQERDDIDNECSDVFSDVVDE
FCTVRGILSKLEQWRETDIVAYTEAYVPLCIPKIICPIIRLQLVTWNPIMESVDLERTKW
YNTLLLYALDNKETEDSLKSDPDVRLVPFAIEKIVLPKLTLIVEKIWDPMSTSQTLRLVG
TVSRLIRDYPNLTDQSKPLLTLFTAILDKMKLAVENDVFIPIFPKQLLDTKHQFFQRQFS
MAVKLLRNLLSWQGLIGDTPLKNLALGSLLNRYLLAGLRVSSAIDALTKANMIMSTLPRA
WLQGETIDHLKMFAVLIQQLSEQLDQANPSHNEAWEYSKSILKIIKPS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttcaataaaccgaaaaggaacattcggcggcggccttttaacgaggatgat
gaagataacgaaaaccgcatggattcaaacgaggattcacaatcctcgaaacttaaaccc
aagaagaaggataaacctaaacaaacgctcctcagcttcggagaggagcttgatgaagcc
gacgacggagaagtatttaaagtgaagaaatcgtcaagaagcaaaaagctgatgaaacag
cttgaccacgagcggaaaaaaaagaaaggtgaagagaaaatgcaagtggactctgagcaa
gcgaacatgtccgttaaacaggaaaaagatttagaaataaagacagacgatctagtagtg
aaaataaaaaataccaatccactgatattgaatggaagagctgccctcgtcgctggcaaa
gatgactatacgtccgaagaggaggaagatgatgcgagtaatcataaatttcgaaaaaat
acagacagagctgacaccatgaagatacttctggagagtggatgtatacccgacgctgca
atgattcatgccgcacgaaaacgtaggcaaaaagcaagggaattagggggcgaattcata
cctatagaggagcagagggaagagaaaggaaaatccagacttgtcagggaagaagatcat
gacagaagcgatgatgaagattctcaagatcgaatcgacatgacagtaaatacagacgca
cgtgacaaagagaaaaggcgggaagcttttttcgcttctcaacttcgagagaaatgtaca
gtttcagataatgaaagtgagcatggtaacgaggaggaagaatgggaagcacaacaaatc
aggaaaggtgtaaccggagctcagatcgctgctgcccagcaagattcgatgcttcaacaa
caatattcgatgggtataaatgttgggcaaataatcgcgccaggattacctctcgaaatg
gcgatgatgccagctccgccacctccgccttccttacatccgccggatcccacaaaaatc
gtacctgttactccgcaagaagttgccaataaaatgcgtggaaggctggagagtctgcga
gaggtgtgcagacgtcatcttctagatcgggatcgggtaatcgaggaattgatacaaact
cacaaggaactggaggaaggtgaagcacgagcgccacaacttgcacagcgcttcagatat
taccaagagttgcgtgggtatgtcactgacttggtagagtgtcttgatgagaagctgcct
ctggtgatcggattggaatcacgctggctagatctttatggagaacgttcagcggagctg
atggagaggcggagacaagatactcgcgatcaagccgaagagatcacttctgcctccagg
agtcaaggaactctcagaagaggcgttgaagatgaaacaagaatccgacgagctacagag
agggaaggtagaagagctcgtcggagacgagctagagaattagcatccaccttgccgaaa
cacattgacggtatgtcaagtgatgacgaagttaccgagcagcaaaatcttgcatttaag
caggaaagagacgatatcgacaatgagtgcagtgatgtattttcagacgttgttgacgaa
ttttgtacagttcgtggaattctatcaaaattagaacaatggcgagagactgacatagtc
gcttacaccgaagcttatgttcctctttgtatacccaagattatatgtccaattataagg
ctgcaacttgttacctggaatccaatcatggaaagcgttgacttggaaagaacaaagtgg
tacaacacgttgctcctctatgcactggacaataaagaaacagaagacagtttgaaaagt
gatcctgatgtcaggctggttccatttgcaatcgaaaaaattgttctcccgaaacttaca
ctgattgtcgaaaaaatctgggaccccatgtcgacgtctcagactctgagattagtaggc
acagtgagccgtttaatcagagattatccgaaccttaccgatcaaagcaaaccattacta
acgcttttcacagccatcttagacaagatgaaactggctgtagagaacgatgtatttata
ccaatattcccaaagcagcttttagatactaaacatcaatttttccaaagacaattctca
atggcagttaaactgctccgcaatttgcttagctggcaaggactgatcggagatactccg
ttgaaaaacttggctctgggatcactgttgaatcggtatcttttagctggtttaagagtg
tcgtccgcaattgatgcccttaccaaagctaacatgataatgagcactcttccacgggct
tggctacagggtgaaacaatagatcatctgaaaatgtttgccgttctcattcagcagctc
agtgaacaactggatcaagccaatccaagccataatgaggcgtgggaatattctaagtcg
atcctgaaaataatcaaaccttcatag
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