Nilaparvata lugens (brown planthopper): 111048730
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Entry
111048730 CDS
T07276
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111048730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
111048730
Enzymes [BR:
nlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111048730
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111048730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
AAA_16
CbiA
MMR_HSR1
Glyco_transf_N
TniB
AAA_18
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111048730
NCBI-ProteinID:
XP_022190368
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All DBs
Position
X:101580520..101595168
Genome browser
AA seq
434 aa
AA seq
DB search
MGDEECEIQVIKLDIECELRFEIENKNETVDLELKTGLAEIFGTEMVKRKPYHFTTGAKI
AVFTYHGCLIQLKGRKNISYISKETPMMTYLNCHTCLEKLRVKAEQEAGGGRGPVTMVVG
PANVGKSTVCRILLNYAVRLGRRPIFVDLDTCQGSISVPGTMGAIVVAEAASLEKGGFSQ
QKPLVFNVGSVKIESNLPLCNIITSRLAEAVQKRQDFNKKECVSGIIVNTARWIKGDGYK
HLCHAAHAFKVDVVLVLDQERLYNELVRDLPKNVQVTLLPKSGGVVEKDQSSRQETRDKR
VREYFYGVSNPKGVGGTILHPHSFDVKWSDLKIFKIGGPSLPDSCMPLGMKAEDNIGHMT
KLVAVQPGPNLLHHLLAVSCASSAENVINTNVAGFICVTAVDTVKRTLTILSPQPRPLPA
KVLILSDIQFMDNN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaggagtgtgagattcaagtaatcaaacttgatatagagtgtgaactgcgt
tttgaaattgaaaacaaaaatgaaacagtcgatcttgagcttaaaactggattggccgag
attttcggcaccgaaatggtgaaacgcaagccgtaccatttcacaacaggagccaaaatt
gctgtgttcacctatcatggctgccttattcaattgaaaggccgcaaaaatatcagctac
atttcaaaggaaacacctatgatgacgtacctcaattgtcacacatgcctggagaagctt
cgcgtgaaggcggagcaggaggcaggcggggggagggggcctgtgacgatggtggtgggg
ccggccaatgtgggcaagtctaccgtctgccgcatcctgcttaactacgctgtccgcctt
ggtcggcgacctatcttcgtcgacctcgacacctgccagggctccatatctgtgcctggc
actatgggtgctatcgtagtggcggaagcagcctcactagagaagggtggcttctcacag
caaaagcccctggtgttcaacgttggtagtgtcaagatagagtctaatctcccgctctgc
aacatcatcacatcccggttggctgaggctgtgcagaagcggcaggatttcaacaagaaa
gagtgtgtttcgggcataatagtgaacacggcgaggtggatcaagggtgacggctacaag
catctgtgccacgcggctcacgccttcaaggtggatgttgtcctagttcttgaccaggaa
cgcctctacaacgaacttgtgcgagatctgcccaaaaatgtgcaagttacgctgctgccc
aagagtggcggggtggtggaaaaagaccagagctcccgacaggagacgcgtgacaagcgg
gtgcgcgagtacttctacggagtgagcaaccctaagggggtaggagggacaatactgcac
ccgcactcgttcgacgtgaagtggtccgacctcaagatcttcaagataggaggaccctcg
ctccccgactcctgtatgccactaggcatgaaggccgaggataatattggtcatatgacc
aagctggttgctgtacagccaggtcctaacctgttgcaccatttactagctgtcagttgt
gcatcttcggcggaaaatgtgatcaataccaatgtggccggtttcatttgtgtgaccgct
gtagacacagttaaacgaacactgaccatcctatcgcctcaaccacgacctctaccggcc
aaagttctcatcttgtctgacatacagttcatggataacaactaa
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