Nomia melanderi (Alkali bee): 116432187 Help Entry 116432187         CDS       T07404                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism nmea  Nomia melanderi (Alkali bee) Pathway nmea03040   Spliceosome nmea04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:nmea00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116432187   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     116432187  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:nmea03041]     116432187    04121 Ubiquitin system [BR:nmea04121]     116432187    03400 DNA repair and recombination proteins [BR:nmea03400]     116432187 Enzymes [BR:nmea01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      116432187 Spliceosome [BR:nmea03041]  Complex B   Other components    Prp19 complex     116432187  Complex C    Prp19-CDC5 complex     116432187 Ubiquitin system [BR:nmea04121]  Ubiquitin ligases (E3)   U-box type E3    116432187 DNA repair and recombination proteins [BR:nmea03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     116432187 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Vps41 NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 eIF2A U-box Tricorn_2nd B-prop_COPA_B_2nd Beta-prop_ACSF4 PAS_11 Cytochrom_D1 RMC1_N Motif Other DBs NCBI-GeneID:  116432187 NCBI-ProteinID:  XP_031844566 LinkDB All DBs Position Unknown AA seq 504 aa AA seqDB search MALSCAISNEVPEHPVVSPVSGSIFERRLIEKYVNENGVDPITGKELTIDQLIDVKTTPI VKPKPPSATSIPAILKILQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGIVQATTIPQPAVAVEAGGTAAQPMEQAGITEDVIQKLQERA TVLTQERKRRGRSVPEDLMPQDSIRAFQTLASHPGLHSASVPGILALDIHSADTSKILTG GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDIVMTASPDTTIRVWNVGTSQTTL LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKVAGQVSQPLTTAQFHPD GLIFGTGTADSQVKIWDLKEQSNVANFPGHSGPITAISFSENGYYLATAAEDSCVKLWDL RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTATATGV RFGKHAQYIASTSMDRTLKLYGLP NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atggcgctctcttgtgcaatttctaacgaggtaccagagcaccctgtcgtatcccccgta tcaggctctatatttgaaagacgtttaattgaaaaatatgtgaatgaaaatggagtggat cctataacagggaaagaattgaccattgaccagctcatcgatgtcaagacgactccaata gttaagcctaagccaccaagtgcaacgtctattccagccatattaaagattttgcaagat gaatgggatgctgttatgttacattcatttacacttagacaacagcttcaaacggctagg caagaattgtctcacgccttgtatcaacatgatgcagcatgtcgtgtgattgctagattg acaaaggaagttacagcagccagagaggctttggctactttgaaaccacaagctggaatt gtacaagctaccactattccacaacctgcagttgcagttgaagctggtggtacagctgct caacccatggaacaagctggtattactgaggatgtaatacagaagcttcaagaaagagcc acggtgctcactcaggagagaaaacgccgcggacgttcagttccagaagatttgatgcca caagatagtattcgcgcatttcaaacacttgcatcacatcctggtcttcattctgccagt gtgcctggtatactagcactcgatattcatagtgcagacactagtaagattctaactggt ggagctgacaaaaatgctacagtattcaataaagatacagagcaagtagttgcaatattg aaaggacatactaaaaaggttacaagggtaatctatcatcctgaagaggatatagtaatg accgcatctcccgatactacaatacgagtatggaatgtagggactagtcaaacaacatta ttattgaaggctcacgatgcccccgttactggactctcgttacatccgaccggtgattat ttactgagttcgtcattggatcagcattgggctttctcagatatacgcactggtagatta ctgactaaggttgccggtcaggttagtcaacctttgactacagctcagttccatcctgac ggattaattttcggtaccggcactgcggattcccaagtgaaaatttgggatttgaaggaa caatcgaatgtagctaatttcccgggtcattcaggaccgattacagcgattagcttttcg gagaacggttattatttagctactgctgctgaagactcttgtgtgaaactttgggatttg cgtaaactgaaaaatttcaagactcttcagttggaagaatcatatgaagtcaaagatatt tgtttcgatcaaagtggaacatatttagctgtcgcaggaacagacgtgagagtgtacctg tgtaagcagtggcaagaattgaaagtgctcaacgatcacacagcaactgcgaccggtgtt cgttttggaaagcatgcacagtatatagcatctactagtatggacagaacattaaaactt tatggattaccttga

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