Numida meleagris (helmeted guineafowl): 110398340
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Entry
110398340 CDS
T06015
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nmel04515
]
110398340 (PCDH18)
Cell adhesion molecules [BR:
nmel04515
]
Cadherins
Protocadherins
110398340 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
PepSY
Syndecan
G1_gp67_N
SusE
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
110398340
NCBI-ProteinID:
XP_021251577
LinkDB
All DBs
Position
4:complement(33759664..33769639)
Genome browser
AA seq
1141 aa
AA seq
DB search
MNCRNLQTRQAGSKMHFMFLFALAVISLDKAVLGKNLKYRIYEEQRVGSVIARLAEDVAD
VLLKIPNPASVRFRAMQRGNSPLLIVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHT
YSLSDNDFFSIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSLLK
ISISDSNDNSPAFEQQSYIIQLLENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSPKI
METFRIDSEKGHLTLLKQVDYEITKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNRPE
ISLNLMSPEKEETAYVSEGSPLDTFVALVRVQDKDSGVNGEVVCKLHGHGHFKLQKTYEN
NYLILTNASLDREKRSEYSLTVIAEDKGTPSLSMVKHFTVQVSDENDNPPRFQTNRYEVV
ILENNSPGAYITSVTATDPDLGDNGQVTYTILETSVLGSSITTYVTIDPSNGAIYALRTF
DHEEVNQIAFMVQARDGGSQQLVSNTTVVLTVIDENDNAPVIVGPALRNSTAEISIPKDA
GIGFLVTRIRATDRDSGMNSELSCSIAADKEDSIFVMDPKTCDISINASVESVPTKQWEF
FVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEATLLSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QSPQQQLQQQQQGLEEDPQPADTSEKKKSFSTFGKDCQGEEESGDSCTSSLLSEMSSVFQ
RLLPPSLDAYTECNEMDRLNSLERRKGHLPAKAVNYPQGVAAWAASTHFQNPANNGPTLG
THSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQ
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcagaaacttacagacgcggcaggctggcagcaaaatgcactttatgttcctt
tttgcactggcggttatatctctcgataaggctgtactgggcaagaacctgaagtaccgg
atttacgaggagcagcgggtcggctcggtcatcgccaggctggcggaggacgtggccgat
gtgctattgaaaatccccaaccccgcctcggtccgattccgagccatgcagagggggaac
tccccactgctcatcgtccgcgaggataacggggagatcagcatcggggctaagatcgac
cgggagcaactctgccaaaaaaacttgaactgctccatcgagttcgatgtgatcactctg
cccaccgagcatctgcagctcttccatgtggaagtggaggtgctggacatcaacgacaac
tccccccagttttccagggctctcatccccatcgaaatatctgagagcgcggccgtgggc
acccgtatccccctggacagtgcttttgacccagatgtgggggacaactcactgcacact
tactccctttctgacaacgattttttcagcatcgaggtgaggacaaggactgatggcgcc
aagtacgcagagctgatcgtggtgagggagctggaccgggagctgaagtcgagctacgag
ctccagctcactgcgtccgataagggggtgccgcagaggtctgggtcgtccctcctgaaa
atcagcatttccgactccaacgacaacagccctgcttttgagcagcagtcgtatataatt
caactcctggaaaactccccagtcgggactttgctcatcgacctcaatgcgaccgaccca
gacgagggcgctaatgggaaggtcgtgtactcctttagcagtcatgtgtctcccaaaatt
atggagactttcaggatagattcagagaaaggacatctgacccttctgaagcaagtggac
tatgaaattaccaagtcctatgaaattgatgcccaggctcaagacatggggccaaattct
attccagctcattgcaaaattataattaaagtggtagatgtgaatgataacagaccagaa
attagcttaaacttgatgtcaccggagaaggaagaaacagcttacgtttctgaggggtcc
cccctggacacgtttgttgcgctggtcagagtgcaggacaaggactcgggcgtgaacgga
gaggtagtttgcaagctccatggtcatggccactttaaactgcaaaagacttacgaaaat
aactatttaatcttgactaatgccagtctagatagagaaaagagatctgagtacagcttg
actgtaatagcagaggacaagggaacgccaagtctctccatggtaaaacactttactgtc
caagtcagtgatgaaaatgacaacccaccccgcttccagacaaacagatacgaagtagtt
atcttagaaaataactctccaggagcctacatcacatccgtcacggccacagacccagat
ctaggggacaatgggcaggtgacctacactattttggagacctctgttttgggaagttct
ataaccacctatgtgaccattgatccctctaacggggcaatctatgccttgagaactttt
gaccatgaagaggtaaatcagattgcctttatggttcaagctagggatggagggagccag
caacttgttagtaacaccacggtggtgctaaccgtcattgatgaaaatgacaatgctcct
gtcatcgtgggcccagcactgcgcaacagcacggcggaaatctcaatccctaaagatgct
gggattggctttcttgtcacgaggataagagctacagatagagactctggcatgaactct
gaactcagctgttccatagcagctgacaaggaagacagcatctttgtgatggatcccaaa
acttgtgacatctccatcaatgcaagtgtagaatcggttccaactaagcaatgggaattt
tttgtcatagtccaggataaaggcagtcctcagctcagtactaaagcgcttctgaagtgt
acggtttttgagtatgtttattcattttcaagcacagaagctactttgctaagccaaccc
tctctggatgtctcgatgataacaattatatccttaggatcaatatgtgccgtgttactg
gtcatcatggttatctttgccacgagatgtaatcgagagaaaaaggacaccaggtcctac
aactgccgtgtggcagaatcgacctaccagcaccacccgaagcggccctccaggcagatc
cacaaaggggacatcacattggtgccaacagttaatggcacgctccccatccgatctcac
cacagagcttccccgtcctcatccccgaccctggagagagggcagatgagcagccggcag
agccaccacagccaccaatcgctgaacagcctggtgaccatctcctccaaccacgtgcct
gagaacttctcactggagctcacccatgcaactccagctgttgagcaggtttctcaactt
ctctcgatgcttcaccagggccagtatcaaccaaggccaagttttcgaggaaacaaatat
tccagaagctacagatatgcccttcaagatatggataaattcagcctgaaggacagtggc
cggggcgatagcgaagctggagacagcgattatgatttgggtagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttacagatgggagaattcctgcagca
atgcggctgtgcacggaggaatgcagggttctaggccactctgaccagtgctggatgcca
ccgttgccatctccctcatccgattacagaagtaacatgttcatccctggggaggagttt
cagtcaccgcagcagcagctgcagcagcagcagcagggcctcgaggaagatccacagcct
gctgacaccagtgaaaagaagaagagcttttcgacgtttggcaaagactgtcagggtgag
gaggaatcaggagacagttgtacctcctctcttctctctgaaatgagcagtgtcttccag
cgcctgctgcctccctcgctagatgcctacacggaatgcaatgagatggatcgcttgaat
tcattggagcgcaggaagggacatttgccagccaaggctgtgaattatccacagggagtg
gctgcctgggcagccagcacacatttccaaaatcctgccaacaatgggccaactctgggg
actcactcaagtgcacagccttcctctaaatggctgccagccatggaggaaatcccggag
aattatgaagaagatgattttgacaatgtactcaatcacctcagtgatggtaaacacgaa
ctcatggatgccagcgagctggtggcagaaattaacaaactgctgcaagatgtccggcag
aactaa
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