Numida meleagris (helmeted guineafowl): 110399413
Help
Entry
110399413 CDS
T06015
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110399413 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmel03041
]
110399413 (SF3B1)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110399413 (SF3B1)
Spliceosome [BR:
nmel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110399413 (SF3B1)
Complex B
110399413 (SF3B1)
Complex C
U2 SnRNP specific factors
110399413 (SF3B1)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110399413 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
VPS15-like_hel
Adaptin_N
Phage_T7_Gp15
UNC45-central
Motif
Other DBs
NCBI-GeneID:
110399413
NCBI-ProteinID:
XP_021253727
LinkDB
All DBs
Position
5:complement(43959632..43980677)
Genome browser
AA seq
1301 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacccacgaagatatcgaagcgcagatccgagaaattcaagga
aaaaagcctgccctcgatgaagcacaaggagtaggcctcgactccaccggatattacgat
caagaaatttatggtggcagtgacagcaggtttgctggatatgtaacatccattgcagca
actgaattggaagatgatgatgacgattacccatctacaagtttgcttggccagaagaag
ccagggtaccatgctccagtggcactgcttaatgacataccgcagtcaactgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
acaccagaccctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acaaaggaagagagggaaattaggcaacagctagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagccgcatctcagccaccttcaaaacgcaagcggcgttgggatcag
acagctgatcagactcctggtgcgacacctaaaaagttatccagttgggatcaagcagag
actcctggacatacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagc
gaaactcctggtgccacccctggctcaaagatctgggatcccactcccagtcacacgccg
gcaggagctgcaacacctggacgagacacacccggtcatgcaacaccaggccacggaggt
gccacgtccagtgcacgtaaaaaccgatgggatgaaacacctaaaacagaaagagatact
ccgggacatggcagtggatgggctgagactcctcgtacagatagaggtggtgattccatt
ggtgagacaccgaccccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgct
agccagatgggtggcagcactcctgttctgacacctggcaaaacacccattggtacacca
gctatgaacatggcaactcctacgccgggtcatatcatgagcatgactcctgaacagctg
caggcttggcgttgggagagggaaattgatgagagaaacagaccactttctgatgaagaa
ttggatgctatgttcccagaaggatataaggttcttcccccaccagctggttacgtacct
attcgtactccggcgcgtaaacttacagcgactcccacacctttgggcggtatgaccgga
ttccacatgcagacagaggaccgcaccatgaagagtgtcaatgaccagccttctggcaat
cttccattcctaaagccagatgatatccagtactttgataagctgctggttgatgttgat
gaatcgactctgagtcctgaagagcagaaggagaggaagataatgaaattacttttgaaa
ataaagaatggcacaccgcccatgagaaaggctgcattgagacaaattactgataaagct
cgggaatttggagctgggccactgtttaatcagattctacctttgctgatgtcaccgacg
ctcgaggatcaggagcgccacttacttgtcaaagtcatagacagaattctgtacaaactg
gatgacctggtccggccatatgtacataagatccttgttgtcattgaaccactgctgatt
gatgaagactattatgccagagtggaaggcagagaaattatttcaaacttggctaaggct
gctggtttggcaacaatgatttctacgatgcgacctgatattgataacatggatgaatat
gtccgaaataccacagctcgagcctttgctgttgttgcctctgctttgggcattccttct
ctgttgccgttcttgaaagctgtctgtaaaagcaagaagtcctggcaggcgaggcatact
ggcatcaagattgtgcagcaaattgctattctgatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgagcatggtcttgtggatgagcagcagaaggttcgtacc
atcagtgctttggctattgccgctttagctgaggcagctactccctatggtatcgagtca
tttgattctgttctgaagcccttatggaagggtatacgtcaacacagaggaaagggcttg
gctgcctttttgaaggctattggttatctgattccactcatggatgctgagtatgcgaac
tattataccagagaagtcatgttaattcttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgttttgaaggtggtaaagcaatgttgtggtacggatggtgttgaagca
aactacattaaaacagagatcttgccaccatttttcaaacacttctggcaacacagaatg
gcattggacaggagaaattacagacagttggtggacacaacagtggagctggcaaataaa
gttggagcagcagaaattatttctagaattgtggatgatctgaaggatgaggctgaacag
tacagaaaaatggtcatggaaacaattgagaagataatgggaaacctgggtgcggcagac
attgatcataagctagaggaacaacttattgatggcatcttgtatgcctttcaagaacag
accacagaggattctgtgatgctgaatggctttggcacagtggttaatgctcttggcaaa
agagttaagccctacttgccacagatctgcggtacggttctgtggcgtttgaacaacaag
tcggctaaagtgcggcagcaggctgctgacctcatctctcgtaccgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacatctgggtgttgtgttgtatgagtacctcggt
gaagaatatcctgaagtactgggcagcatacttggagcgcttaaggctattgttaatgtc
ataggtatgcacaagatgacaccgcctatcaaagatctgctgccgcggcttacgcctatt
ctgaagaacaggcatgagaaagtacaggagaattgtatcgatcttgttgggcgcattgca
gacagaggtgcagaatatgtttctgcaagagaatggatgaggatctgctttgagctgctt
gagttactaaaagctcacaagaaagcgattcgaagagccacagtaaatacttttggatat
attgcaaaagctattggacctcacgatgtcttggctactctgttgaataacttgaaagta
caggaaaggcagaacagagtatgtactacagtagcaattgctattgtagctgaaacatgc
tcaccgttcacagtgctgcctgcgctcatgaatgaatacagagttcccgaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgaatacattggagagatgggaaaa
gattatatttatgccgttacgccattgcttgaagacgctttaatggacagagatcttgta
cacagacaaacagccagtgccgtggtgcagcacatgtctcttggtgtttatgggtttggc
tgtgaagattctcttaatcatttgttaaactacgtatggcctaatgtgtttgaaacttct
ccgcacgtcattcaggcagtcatgggggctctggagggcctcagagtggctattggccct
tgtcgaatgttgcagtattgtttgcagggtttgtttcaccctgcccggaaagtcagagat
gtttattggaagatttataattccatctacattggctcacaggatgctctgatagcacac
tatccgagaatctataatgatgaaaagaacacctatattcgttatgaacttgactacatc
ttataa
DBGET
integrated database retrieval system
