KEGG   Nocardioides mesophilus: H9L09_00950
Entry
H9L09_00950       CDS       T07004                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
nmes  Nocardioides mesophilus
Pathway
nmes02020  Two-component system
nmes02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:nmes00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H9L09_00950
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    H9L09_00950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nmes03021]
    H9L09_00950
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nmes02035]
    H9L09_00950
Transcription machinery [BR:nmes03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H9L09_00950
Bacterial motility proteins [BR:nmes02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    H9L09_00950
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 Sigma70_ECF HTH_38 KORA UPF0122
Other DBs
NCBI-ProteinID: QNN53103
UniProt: A0A7G9RBX8
LinkDB
Position
complement(216447..217181)
AA seq 244 aa
MTPPDRDDSVLLVWKEFQQTRDAALRNRLVMQYAPLVKYVAGRMRARLPESVDQDDLVSD
GVLGLMDAIERFEPARGLTFQTFAVPRIRGAIIDGMRAMDFVPRSVRDKIRAISQAQTAL
EARLGRLPEDHEVAGETGLPLQQVRDLLRQASGNHANVDDFDLADELSTAGESRVEAGDD
NVSLMKVVDQLSERDQVVIALYYYEGLTLAEIGQVLGVTESRISQVHSRATASMRAKLLA
LETV
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaccccgccggaccgcgacgactcggtgctcctggtctggaaggagttccagcagacc
cgggacgccgccctgcgcaaccggctggtcatgcagtacgccccgctggtgaagtacgtc
gccggccggatgcgggcccggctgccggagtcggtcgaccaggacgacctggtctccgac
ggggtgctcggcctgatggatgccatcgagcgcttcgagcccgcccgaggactcaccttc
cagaccttcgcggtgccccgcatccgcggcgcgatcatcgacggcatgcgcgcgatggac
ttcgtgccgcgctcggtccgcgacaagatccgggcgatctcccaggcccagaccgccctc
gaggcgcggctcggccggctcccggaggaccacgaggtggccggcgagaccgggctgccg
ctgcagcaggtgcgcgacctgctccgccaggcgtccggcaaccacgccaacgtcgacgac
ttcgacctcgccgacgagctgtccacagccggcgagtcccgggtggaagccggcgacgac
aacgtctcgctgatgaaggtcgtcgaccagctctccgagcgtgaccaggtggtgatcgcg
ctctactactacgaggggctgaccctcgcggagatcggccaggtgctcggcgtcaccgag
tcccggatcagccaggtgcacagccgggcgaccgcgtcgatgcgcgccaagctgctcgcg
ctggagaccgtctga

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