Neisseria meningitidis 053442 (serogroup C): NMCC_2013
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Entry
NMCC_2013 CDS
T00633
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nmn
Neisseria meningitidis 053442 (serogroup C)
Pathway
nmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMCC_2013 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmn03021
]
NMCC_2013 (rpoB)
03400 DNA repair and recombination proteins [BR:
nmn03400
]
NMCC_2013 (rpoB)
Enzymes [BR:
nmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMCC_2013 (rpoB)
Transcription machinery [BR:
nmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMCC_2013 (rpoB)
DNA repair and recombination proteins [BR:
nmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMCC_2013 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ABX74136
LinkDB
All DBs
Position
complement(2060135..2064250)
Genome browser
AA seq
1371 aa
AA seq
DB search
MEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGE
PLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFV
INGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFR
IDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILD
KEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDE
ITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPP
TEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAAD
KGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERA
VKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRV
IDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMD
VATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSAT
AIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAVKAG
DVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYTSIHIE
ELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRAQSIIDSELK
RYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLAGLPSRHDWFDI
RLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQKMVKVFIAIKRRL
QAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPSRMNIGQILEVHLGWA
AKGIGERIDRMLKEQRKAGELREFLNKLYNGSGKKEDLDALTDEEIIELASNLRKGASFA
SPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITLYDGRSGEAFDRKVTVGVMH
YLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEML
TVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEIRSLGLDIDLERY
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
ttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagtttttgcagctg
gaaaatgcttttgacaaacgtaccgatgacggtctgcaggcggcatttaattctattttc
ccgattgtgagccataacggttatgcgcgattggagtttgtgcattacacattgggcgag
cctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcccccttgcgc
gcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggtaaaagaagtt
cgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggttcttttgtg
attaacggcacagagcgtgtgattgtctcccagttgcaccgttcgcccggcgtattcttc
gagcatgacaaaggtaagacgcactcttccggcaagttgttattctccgcccgtatcatt
ccctaccgtggttcatggttggattttgaatttgatccgaaagatttgctgtatttccgt
atcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttgggctacaacaat
gagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttcaaacggtgtt
caaaccgatttggtcgcaggccgtctgaaaggcgaaactgccaaggtcgatatcttggat
aaagaaggcaatgtattggttgccaaaggtaagcgcattactgcgaaaaatatccgtgat
attaccaatgcaggcctgacccgtttggatgtagaaccagaaagcctgctgggcaaagca
ttggctgccgatctgattgattcggaaaccggcgaggtattggcttctgccaatgatgaa
attacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaattacgaccctt
tacatcaatgagttggatcagggtgcttatatctccaataccttgcgtacggatgagact
gccggccggcaggcggcgcgtgttgcgatttaccgtatgatgcgtccgggcgaaccgccc
actgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagacagctacgat
ttgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaactgtccgaa
gcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggtgctgccgac
aaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgactttggtcgag
ttgcgtaacggccatggcgaagtggacgatatcgatcacttgggcaaccgccgagtacgt
tcggtaggcgagctgactgaaaaccaattccgtagcggtttggcccgtgtggaacgtgcc
gtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgatttgattaat
gcaaaacctgtttctgctgctattaaagaattcttcggctccagccaattgagtcagttt
atggatcagaccaatcccttgtctgaagtaacccataaacgccgcgtatccgcattgggt
ccgggcggtttgacccgcgaacgtgcaggatttgaggtgcgggacgtgcatccgacccac
tacggtcgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttgatcaactca
ttgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttaccgccgcgtt
atcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaaggccgctat
gtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggcgatttggtt
acctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaatatatggac
gtggcaactggtcaagtggtatccgttgcagcatccctgattccattcttggaacatgat
gacgcgaaccgcgcattgatgggtgccaacatgcaacgtcaggcagtgccttgcttgcgt
cctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgactctgctact
gcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgcgttgtgatc
cgtgtccatgacgacgaagcgactgccggtgaagtgggtgtcgatatttacaacttggtt
aaattcacccgttccaaccagtctaccaatatcaatcagcgtcctgccgtcaaagccggc
gatgttttgcaacgcggcgatttggtggccgacggcgcgtccaccgatttgggcgaattg
gctttgggtcaaaacatgaccatcgccttcatgccgtggaacggttacaactacgaagac
tcgattctgatttccgaaaaagtggctgcggacgaccgctatacttcgattcacattgag
gaattgaatgtcgttgcccgcgatactaagctgggtgcggaagacattacccgcgatatt
ccgaacttgtccgagcgtatgcaaaaccgtttggacgaatccggtatcgtttacatcggt
gcggaagtagaagccggcgatgtgttggtaggcaaggtaacgcctaaaggcgaaacccaa
ctgacgccggaagaaaaactgctgcgcgccatcttcggtgaaaaagcatctgacgtaaaa
gatacttcattgcgtatgcctaccggcatgagcggtaccgttatcgacgttcaagtcttc
actcgtgaaggtattcaacgcgacaaacgcgcccaatccattatcgattccgagttgaaa
cgctaccgtttggatttgaacgaccaattgcgtattttcgacaacgacgcattcgaccgt
atcgaacgtatgattgtgggtcaaaaagccaatggtggtccgatgaagctggctaaaggc
agcgaaattactaccgaatatttggcgggtctgccgagcaggcacgattggttcgatatc
cgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagcctgcaacaa
aaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacccaaggcgac
gaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaacgccgtctg
caagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcgcgcattctg
ccagtggaagacatgccttacatggcggacggccgtccggtagacatcgtactgaaccca
ttgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttgggttgggca
gcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaagcaggcgag
ttgcgcgagttcttgaacaaactctacaacggcagcggcaagaaagaagatttggatgcc
ctgactgatgaagaaatcatcgaactggcctccaacctgcgtaaaggtgcatctttcgcc
tctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgttgaacttggcttat
ccgagcgacgatcctgaggttgaaaaactgggcttcaacgacagtaaaacccaaatcacg
ctgtatgacggccgttcaggcgaagcatttgaccgcaaggttacagtaggtgtgatgcac
tatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccgtac
agtctggttacccagcagcctttgggcggtaaagcccagttcggcggccaacgtttcggt
gagatggaggtttgggcactggaagcatacggcgcagcctacacgctgcaagagatgctg
actgtgaagtctgacgacgtgaacggccgtaccaaaatgtacgaaaacatcgtcaaaggc
gaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggtcaaagagattcgc
tcactgggcttggatatcgatttggaacgttactaa
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