Neisseria meningitidis NZ-05/33 (serogroup B): NMBNZ0533_0134
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Entry
NMBNZ0533_0134 CDS
T01949
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nmz
Neisseria meningitidis NZ-05/33 (serogroup B)
Pathway
nmz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMBNZ0533_0134 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmz03021
]
NMBNZ0533_0134 (rpoB)
03400 DNA repair and recombination proteins [BR:
nmz03400
]
NMBNZ0533_0134 (rpoB)
Enzymes [BR:
nmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMBNZ0533_0134 (rpoB)
Transcription machinery [BR:
nmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMBNZ0533_0134 (rpoB)
DNA repair and recombination proteins [BR:
nmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMBNZ0533_0134 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ADZ02619
LinkDB
All DBs
Position
138436..142614
Genome browser
AA seq
1392 aa
AA seq
DB search
MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFNSI
FPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTVKE
VRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYGNEQILDIFYDKETFYLSSNG
VQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLLGK
ALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRTDE
TAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQKLS
EAQQNSWYGRLLNETFAGAAEKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNRRV
RSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQLSQ
FMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIN
SLSVYARTNDYGFLETPYRRVIDGKVTKEIDYLSAIEEGRYVIAQANADLDSDGNLIGDL
VTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCL
RPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNL
VKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYE
DSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYI
GAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQV
FTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAK
GSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQG
DELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLN
PLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLD
ALTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQI
TLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVKEI
RSLGLDIDLERY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaagcgggaaaat
gttttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagtttttgcag
ctggaaaatgcttttgacaaacgtaccgatgacggtctgcaggcggcatttaattctatt
ttcccgattgtgagccataacggttatgcgcgattggagtttgtgcattacacattgggc
gagcctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcccccttg
cgcgcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggtaaaagaa
gttcgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggttctttt
gtgattaacggcacagagcgtgtgattgtctcccagttgcaccgttcgcccggcgtattc
ttcgagcatgacaaaggtaagacgcactcttccggcaagttgttattctccgcccgtatc
attccctaccgcggttcatggttggattttgaatttgacccgaaagatttgctgtatttc
cgtatcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttgggctacggc
aatgagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttcaaacggt
gttcaaaccgatttggtcgcaggccgtctgaaaggcgaaactgccaaggtcgatatcttg
gataaagaaggcaatgtattggttgccaaaggtaagcgcattactgcgaaaaatatccgt
gatattaccaatgcaggcctgacccgtttggatgtagaaccggaaagcctgctgggtaaa
gcattggctgccgatctgattgattcggaaaccggcgaggtattggcttctgccaatgat
gaaattacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaattacgacc
ctttacatcaatgagttggatcagggtgcttatatctccaacaccttgcgtacggatgag
actgccggccggcaggcggcgcgtgttgcgatttaccgtatgatgcgtccgggcgaaccg
cccaccgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagacagctac
gatttgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaactgtcc
gaagcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggtgctgcc
gaaaaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgactttggtc
gagttgcgtaacggccatggtgaagttgacgatatcgatcacttgggcaaccgccgagta
cgttcggtaggcgagctgactgaaaaccaattccgcagcggtttggcccgtgtggaacgt
gctgtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgatttgatt
aatgcaaaacctgtttctgccgctattaaagaattcttcggctccagccaattgagtcag
tttatggatcagaccaaccccttgtctgaagtaacccataaacgccgcgtatccgcattg
ggtccgggcggtttgacccgcgaacgtgccggcttcgaggtacgggacgtgcatccgacc
cactacggccgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttgatcaac
tcattgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttaccgccgc
gttatcgacggcaaagtaaccaaggaaatcgattacttgtctgccatcgaagaaggccgc
tatgtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggcgatttg
gttacctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaatatatg
gacgtggcaactggtcaagtggtatccgttgcagcatccctgattccgttcttggaacac
gatgacgcgaaccgcgcattgatgggtgcgaatatgcaacgtcaggcagtgccttgcttg
cgtcctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgactctgct
actgcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgtgttgtg
attcgtgtccatgacgacgaagcgactgccggcgaagtgggtgtcgatatttacaacttg
gttaaatttacccgttccaaccaatctaccaacatcaaccaacgtccggccgtaaaagca
ggcgacgtgttgcaacgcggcgacttggtggccgacggtgcgtctaccgacttgggcgaa
ttggctttgggtcaaaacatgaccatcgccttcatgccatggaacggttacaactatgaa
gactcgattctgatttcagaaaaagtggctgcggatgatcgttacacttcgattcacatt
gaggaattgaatgtcgttgcccgcgataccaagctgggtgcggaagacattacccgcgat
attccgaacttgtccgagcgtatgcaaaaccgcttggacgaatccggtatcgtttacatc
ggtgcagaagtagaagccggcgatgtgttggtaggcaaagtaacgcctaaaggcgaaacc
cagctgacgccggaagaaaaactgttgcgcgccatcttcggcgaaaaagcgtctgacgta
aaagatacttcattgcgtatgcctaccggtatgagcggtacggttatcgacgttcaagtc
ttcactcgtgaaggtattcaacgcgacaaacgcgcccaatccattatcgattccgagttg
aaacgctaccgtttggatttgaacgaccaattgcgtattttcgacaacgacgcattcgac
cgtatcgaacgtatgattgtgggtcaaaaagccaatggtggtccgatgaagctggctaaa
ggcagcgaaattactaccgaatatttggcgggtctgccgagcaggcacgattggttcgat
atccgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagcctgcaa
caaaaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacccaaggc
gacgaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaacgccgt
ctgcaagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcgcgcatt
ctgccagtggaagacatgccttacatggcggacggccgtccggtagacatcgtactgaac
ccattgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttgggttgg
gcagcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaagcaggc
gagttgcgcgagttcttgaacagactctacaacggcagcggtaagaaagaagatttggat
gccctgactgatgaagaaatcatcgaactggcctccaacctgcgcaaaggtgcatctttc
gcctctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgctgaacttggct
tatccgagcgacgatcctgaggttgaaaaactgggcttcaacgacagtaaaacccaaatc
acgctgtatgacggccgttcaggcgaagcatttgaccgcaaggttacagtaggtgtgatg
cactatctgaaactgcaccacttggttgacgaaaaaatgcacgcgcgttctaccggtccg
tacagtctggttacccagcagcctttgggcggtaaagcccagttcggcggccaacgtttc
ggcgagatggaggtttgggcattggaagcatacggcgcggcatacacgctgcaagagatg
ctgactgtgaagtctgacgacgtgaacggccgtaccaaaatgtacgaaaacatcgtcaaa
ggcgaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggtcaaagagatt
cgctcactgggcttggatatcgatttggaacgttactaa
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