Nipponia nippon (crested ibis): 104012347
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Entry
104012347 CDS
T05756
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104012347 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nni03041
]
104012347 (PRPF40A)
Spliceosome [BR:
nni03041
]
Complex A
U1 snRNP components
U1 related factors
104012347 (PRPF40A)
Complex B
104012347 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104012347
NCBI-ProteinID:
XP_009462989
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTNSSANEEHSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEENSTKPEDSTPATSASAAAAEAANTTTTAATAAETAAAGP
TNPSAAPEGESAAASVVENESTGTAAAEEQGQATSAPAAQEQSGETAANAADDSSKQETS
GDAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYS
ALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQM
FGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTT
WSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRK
NRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLK
ARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAE
AREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESER
KRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRSE
SRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIEREKDKKERERDSEKDRAR
QRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccacattatcctcccatgggaatgcaccccatgggtcagaga
ccaccaaatatgccgccagttccacatggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatggat
gcacaagtaggtgtaacacctcctggaactcaaacaacacatcccgtagtttgtgcagcc
cagcaaactgccacaaccaacagttctgctaatgaagagcactctaaacagaaatctacg
tggacagaacacaaatcacctgatggaagaacgtattactataatactgaaacaaagcag
tctacatgggagaagccggatgatctcaaaacacctgctgagcaattgttgtctaagtgt
ccctggaaagagtataaatctgattctggaaagccctactattataattcccaaacaaag
gaatcacgttgggcaaaacccaaagagcttgaggatcttgaagcaatgattaaagctgaa
gaaaacagcacaaagcctgaagactcaactccagcaacatctgcctcagctgctgcagca
gaggcagcaaacacaaccaccacagccgcaactgctgctgaaactgctgcggctggccct
accaacccctccgcagcccccgaaggagaatctgctgcagcttctgtggtagaaaatgag
agcactggcacagccgcagctgaggaacagggacaagcaacttctgcacccgctgcgcag
gaacagagcggagaaactgcagctaacgcagcagacgactcttccaagcaggagacttca
ggagatgctgcttcaaagaaagaggacgacgatgcccaaccagttaaaaaaacctataca
tggaatacaaaggaagaagcaaagcaagcatttaaagaactgttaaaagaaaagcgagta
ccgtccaatgcttcttgggagcaagctatgaaaatgatcattaatgatcctagatacagt
gctttggcaaaattaagtgaaaaaaagcaagcctttaatgcttacaaagttcaaacagaa
aaagaagagaaagaagaagcaagatcaaaatacaaagaagctaaggaatccttccaacgt
tttcttgaaaaccatgaaaagatgacatccacaacaagatacaaaaaagctgaacaaatg
tttggggagatggaagtctggaatgcaatatctgagcgtgatcgtcttgaaatttatgaa
gatgtcttgttttttctgtctaagaaagagaaggaacaagccaaacagttacgaaagagg
aattgggaagctttgaagaacatactagataacatggctaatgtcacttactgtactact
tggtcggaggctcagcagtatctgatggacaatcctacatttgctgaagatgaggaactt
cagaacatggataaggaggatgcactgatctgttttgaggaacatatcagggcactggaa
aaagaggaggaagaagaaaaacagaaaagtttgcttagagaaagaaggcggcagcgtaaa
aatagagaatcttttcagctatttttagatgaactgcacgagcatggacaattacattcc
atgtcctcttggatggagttgtacccaaccataagctctgacatcagattcacaaatatg
cttggtcagcctggatcaacagcacttgatcttttcaagttctatgttgaagacttgaag
gcacgttaccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtg
gttgaagtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagct
actactttagatgcaggaaatatcaaactggctttcaacagtctgctagaaaaggcagaa
gcccgtgaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgcc
ttcaagagtatgttgaagcaagctactcctccaattgaactggacgctgtctgggaagac
atcagagatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaaga
aaaagaatatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattca
aagaacaagaaacactctaaaaagtctaaaaaacatcacaggaaacgatcacgctctcgt
tcgggctcagagtccgaggatgacgatagccactcaaagaagaaaaggcagcgttcagaa
tctagatcagtttctgagcgttcttccagtgcagaatctgagagaagttacaagaagtca
aaaaaacacaagaaaaagagcaagaagagaagacacaagtctgattcaccagaatcggat
attgaacgagaaaaagacaagaaagaaagagagagagatagtgaaaaggatagagctaga
caaagatctgaatcgaaacataaatctcctactaaaaaacgacccggaaaagattccggg
aactgggatacttctggcagcgaactgagcgaaggggagttggaaaaacagaggaggact
cttttggaacaactggatgaagatcaatga
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