Nipponia nippon (crested ibis): 104017777
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Entry
104017777 CDS
T05756
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04510
Focal adhesion
nni04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104017777 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104017777 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nni00535
]
104017777 (COL9A2)
Proteoglycans [BR:
nni00535
]
Extracellular matrix (ECM) proteoglycans
Others
104017777 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104017777
NCBI-ProteinID:
XP_009469119
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MAACSPVLQLWLLLQAACLCLAQIRGPPGEPGPRGPPGPPGVPGADGIDGDKGSAGAPGS
PGAKGEPGAPGPDGPPGKPGIDGLTGAKGEPGPIGGPGLKGQPGLPGPPGLPGPALPGPP
GLPGQVGLPGEIGALGPKGDPGPDGPRGPPGPPGKPGPPGHIQGLEGSADFLCPTSCPPG
PKGPQGLQGLKGHRGRPGALGEPGRQGRQGPKGDIGVSGEQGVPGPPGPQGLRGYPGMAG
PKGETGPAGYKGMVGTIGAAGRPGREGPKGPPGDPGEKGDLGGRGIRGPQGDIGPKGENG
LPGIDGKDGTPGIPGVKGGVGQAGRPGTPGHRGQAGLPGQPGSKGGPGDKGEVGARGQPG
VTGAPGQIGEPGPRGEQGPQGVPGMKGDRGERGLVGPPGEQGKAGPKGEQGPPGIPGPQG
LPGVKGDKGSPGKTGPKGGTGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGELGFPGPSG
DAGAPGVRGYPGPPGPRGLVGERGVPGMPGPRGVAGRDAGDQHIIDVVLKMLQEQLVEVA
VSAKRAALGGVGAMGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNIGPKGKRG
EKGERGEAGRGHPGMPGPPGIPGLPGIPGHALDGKAGERGLPGSPGEAGRPGLPGPAGLP
GFCEPAACLGASAYAAARLTEPGAVKGPVY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctgctcccccgttctccagctctggctcttgctccaagccgcctgcctctgc
ctggcccagattcgagggccgccgggagagcccggcccacgagggccccccggtccccca
ggagtgccgggagcggatggcattgacggtgacaaaggctcagccggagcccccgggtcc
ccgggtgccaagggggagcctggagcccctggtccagatggacccccagggaagccgggc
atcgacggcctgacgggagcgaaaggggagccagggcccatcggcgggccaggacttaaa
ggccagcccggactcccagggccaccggggctccccggccctgcgctgccaggaccacct
gggcttccaggccaggttgggcttcccggagagattggagcgctgggacccaagggtgac
cctggacccgacggcccgcggggtcccccaggccctccagggaaacccggcccgccagga
cacatccaaggactggaaggcagcgctgatttcttgtgcccgaccagctgcccgccaggt
cccaagggcccccagggattgcagggactgaagggacacagaggccgccccggcgccctc
ggggagcccggcaggcagggcaggcagggccccaagggtgacattggcgtctccggagaa
caaggcgtcccaggccctccgggaccgcagggcctgaggggttaccccgggatggcggga
cccaagggtgagacgggtcctgctggttacaagggcatggtcgggaccattggagcggct
gggcggccgggcagggaaggccccaagggaccacctggggaccctggtgagaagggagat
ctgggtggccgtggcatcaggggcccccaaggagacattggccccaagggggagaacggt
ctcccaggcatcgatggcaaagacggcaccccgggtatcccaggtgtgaagggcggcgtg
ggacaggccggccgccccgggacaccgggacaccgaggacaagctggcttgccgggccag
ccgggaagcaaaggtggcccaggagacaagggtgaagtgggtgctcggggccagcccggt
gtcaccggtgccccggggcagattggtgagcctggacctcggggtgagcagggaccgcag
ggtgtccccgggatgaagggcgaccggggcgaacgcggcctcgtgggcccccccggcgag
caggggaaagcggggcccaagggtgagcagggtccgccggggatcccaggaccccaaggc
ttgccaggagtcaaaggagacaagggctccccagggaaaaccggccccaaaggcggtact
ggagacccaggcgttcacggcctcgcagggctgaagggagagaagggtgaatcgggcgag
ccagggccaaagggacagcaaggcatccagggtgagcttggcttcccgggcccctcgggg
gacgcaggcgcgcccggcgtgcgaggctacccgggaccccccggcccacgaggactcgtc
ggggagcgcggtgtgccggggatgcctggcccacgaggcgtagcgggccgggacgctggg
gaccagcacatcatcgacgtggtcctgaagatgctgcaagagcagctggtggaggtggcg
gtcagcgccaagagagcagccctgggtggagtcggtgccatgggacccccaggacccccc
ggtcccccagggccacccggtgagcagggcccgcatggacccatgggacctcgaggtgtc
cccggcatcctgggtgctgctgggcagatcggcaacataggacctaaagggaagcgagga
gagaagggtgagcggggagaagctggccgtggccacccgggcatgccgggtcccccgggg
atcccaggtctccccggcatccccggccacgcacttgatggcaaggccggggagcggggc
ctgccgggctcgccgggagaggctggccggccgggcttgcctggtcccgctggcctgccg
ggattttgcgagccggccgcctgcctcggagcctcggcgtatgccgccgcacgcctgacg
gagccaggggccgtcaagggacccgtctactga
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