Nipponia nippon (crested ibis): 104021992 Help Entry 104021992         CDS       T05756                                  Symbol COL9A1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism nni  Nipponia nippon (crested ibis) Pathway nni04510   Focal adhesion nni04512   ECM-receptor interaction nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104021992 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104021992 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104021992 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:nni00535]     104021992 (COL9A1) Proteoglycans [BR:nni00535]  Extracellular matrix (ECM) proteoglycans   Others    104021992 (COL9A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  104021992 NCBI-ProteinID:  XP_009473920 LinkDB All DBs Position Unknown AA seq 919 aa AA seqDB search MKGNWKITAFFYVCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFDLI SQFQIEKAASQGIIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGADGSLQTASFLHLPFLFDSQW HKLMISVEANSVTLFIDCIKIESLNIKPKGKISVDGFAVLGKLKNNPEISVPFEIQWMVI HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGLPGKGLLGP PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT KGARGLDGEPGPQGLPGAPGDRGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGXXXIPGPKGNRGPPGVPGLMGN SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGEPGSRGPEGSRGL PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLR RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE RGFPGRGPKGYPGPRGLPGEPGKPSYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCE PSSCRMQAGQRAGKNMKGP NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgaaaggcaactggaaaattacagctttcttttacgtgtgtagttttctgtggtctttc atctcagccaccatccagcaacaatcacgactaccagtcattctcggtgccagtcagaga actgatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacttgatt tctcagttccaaatagaaaaagctgcttcccaaggaattatccagagagtagtgggctcc acttctctacaagtggcttataaattgggacccaatgtagacttcaggatcccaaccagt gccatatattccaacggattgcccgatgaatattcctttctaactacttttcggatgact ggagccacacttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa caagttggagtgaatcttaatggccaaatgaaaagcgttgagttttcttataaaggagcg gatggaagtctccaaactgcatcatttttgcatttgcctttcttgtttgactcccaatgg cacaagcttatgataagcgtggaagcaaacagtgtcacactttttattgactgtattaaa atagaatccttaaacataaaaccaaaagggaaaatcagtgttgatggctttgctgtgctt ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt cactgcgacccgctccgaccccagcgcgaaggctgcggcgagctgccggcccggataagc cagacggtaatcgagagaggtctccctggtccaccaggccccccgggtccgccggggcca ccaggagttcccggtattgatggcatcgatggggagagaggtccgaacggcccccctggt ccaccgggtccagatggggatgcaggcaaaccaggatcccctggcctgcctggagagccg ggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggacag aagggtgaaccaggactgccaggtgctcgtggacttccaggcaaggggcttcttggacca cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga gatccaggaaaaagagggccaccagggccaccaggaccaccaggccctcgaggaacaatt ggcctgcaagatggtgatccattgtgtcccaatgcttgtccacctggccgcccaggacat gctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaaccagga aaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaa ggccctccaggcatcctaggtatcagaggtataactggtataatgggacctaaaggtact aaaggagctcgtggacttgatggtgagcctggtccccaaggtcttcctggtgcacctggg gatcgaggacagagaggtccattgggagaggcaggtccaaagggagaaaggggccctcaa ggtacaagaggaataaatggtctccctgggcctaaaggagagtctggcttaccaggtgtc gatggccgggaagggatccctggaatgccaggagcaaaaggtgaaccaggaaaacccgga gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggnnnnnnn nncattcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaat tctggtaaaccgggtgaacaggggccagagggagaagcaggtccaacaggaccccgggga ccaccaggtagcagaggggagccaggtcctgcgggtcctccaggtttaccagggaaatgg ggtccccagggtgatattggacttcctggactgccaggtcctccaggcctacctggtggt aagggtgaccggggttcagtgggtgaaccaggacctaagggtgaacaaggtgcacctgga gcagaaggagatggaggagaaaagggtgacttgggtgatatgggattaccaggagcaaag ggagctgttggtaatcctggagagcctggttcccgtgggcctgagggaagtcggggactg cctggcatggaagggccacgaggctcacctggaccgcgaggcttgcagggtgaacagggt gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcagcacatt aagcaggtctgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttagg aggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgctccaggg cctgctggcgaaaatggcttcccaggacagcttggaccccgtggcttgcctggccttaaa ggtccccctggtgagatcggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa agaggatttccaggcagaggaccgaaaggttaccctggaccaagaggtcttccaggtgaa ccaggcaaacccagctatggcagggaaggccgtgatggtgaacgaggtctccctggggtg gccggtcagcctggggttcctggtcctcctggccctcccggccctccggggtactgcgag ccgtcgtcttgcagaatgcaggctggacagagagctggtaagaacatgaaagggccgtga

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