Nestor notabilis (Kea): 104404871
Help
Entry
104404871 CDS
T08494
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03013
Nucleocytoplasmic transport
nnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104404871 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104404871 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104404871 (THOC2)
03041 Spliceosome [BR:
nnt03041
]
104404871 (THOC2)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104404871 (THOC2)
Spliceosome [BR:
nnt03041
]
Complex C
Other components
EJC/TREX
104404871 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104404871 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104404871
NCBI-ProteinID:
XP_010011706
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MRAFLAEVSAPVPTFLPILRVLALYSLIQARLGQLVIRICPASVQLCRAVSENKSHDSVG
FRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEK
SKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQK
FNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECR
PEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDL
EDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPP
DNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAIALCQLVHVTVEPLYRRVGVP
KGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMK
EFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRY
RLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFD
YILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQS
LASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLE
AMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEK
HLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPM
YAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFY
ATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEE
EKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVE
LVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYE
KECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIR
NILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMI
PENEFHHKDPPARNAVAATVQNGPGGAGMPTSLAINTVRLEEGTAEETDKLKEKSQGVVK
VINKAVNATPKVTTSNGNSASNSKIIKEKEDKEKSGKEKDKEKKDKTPAATPEMKALGKD
GKDKPKEERANKDDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTSEK
EREKEPSRERDVAKEMKSKENAKGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSS
PSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDDKD
RKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSS
GKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctttctggcagaggtctcagcccccgttcccacttttctacctattttgcgg
gtactagcactttattctttgattcaggcaaggttgggtcagctagtcattcgtatttgc
cctgcaagtgtgcaattatgtcgtgcagtcagtgaaaacaagagccatgattctgtgggt
ttcagagatatccagcaagctctgtatgagcttgcatatcacgttgtcagaggaaactta
aagcatgatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatgcct
tccattctagctgatgtattctgcatattagatattgaaacaagctgtttagaagaaaaa
agtaagagagatcactttacccagctggtattagcctgtttgtatcttgtatctgacact
gtcctaaaggagcgtttagatccagagacgctggagtcattaggacttatcaagcagtca
caacagttcaatcagaaatcagttaaaataaagacaaaactattttataagcaacagaag
tttaatttattgagagaggaaaatgaaggttatgcaaagctcattgcagaactcgggcaa
gacttatctggaaatatcactagtgatctaatccttgaaaatatcaaatctttaatagga
tgctttaacctcgatcctaacagagttttggatattatccttgaagtctatgagtgcagg
cctgagtatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaacct
caaactctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgag
acaccttcctccttatacagagttgctgctgtccttctgcaacataatctcatagatttg
gaagacctttatgttcatcttcttccgggggataatgccatcattgaggaacacaaacga
gagatcgtggaagctaagcaaattgtcagaaagcttacaatggtcgtcttatcctcggaa
aagactgaggaaaaggagaaagaaaaagaaaaagaggaggaaaaaactgagaagcctcct
gataatcagaaacttggcttattggaagctttattaaaaattggtgactggcagcacgca
caaagtattatggatcagatgcctccgttttatgctacttcacacaagcctattgcaatt
gccctttgccagcttgtacatgttacagttgaacctctgtaccgcagagttggtgtacct
aaaggagctaaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcg
gacagcttcgaggacctgagaaaggaagtgttcaacatgctttgttaccttggtcctcat
ctctcccatgatcccattctatttgcgaaagtggtgcgtcttggaaaagcatttatgaaa
gagtttcagtctgatggaagcaaacaagaagataaagagaaaatggagatactgtttagc
tgtctgttgagtattactgatcaagtcttactgccgtctctttctctgatggactgtaat
gcatgcatgtctgaagaactatggggaatgttcaaaacttttccatatcagtaccggtac
cgtctttatgggcaatggaagaatgaaacatacaatagtcacccacttctagtgaaagtt
aaagctcagaccatagaccgagccaaatacatcatgaagcgtttaactaaggaaaatgtg
aaaccctctggaagacaaattgggaagctcagccacagcaatcctacaattttatttgac
tatatcttatcacaaatacaaaaatatgataacttaataactccggttgttgattcgctg
aaatacctcacttcgctgaactacgatgtcctggcatactgtattattgaagctctagca
aaccctgagaaggagagaatgaagcacgatgacactacaatctcgagctggctgcagagt
ctggctagcttttgtggtgcagtgttccgaaaatacccaattgaacttgctggtctactt
cagtatgtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagag
gtagtacagaaaatggcagggatagaaatcacagaagaaatgacaatggagcaattggaa
gccatgactggtggagaacaactaaaagctgagggtggatactttggccagattaggaat
acgaaaaaatcttctcagagattgaaagatgcattattggaccatgatcttgcccttcca
ctgtgcctgcttatggctcaacagagaaatggtgtgatctttcaagagggaggggaaaaa
catctgaagctggtgggaaaactatatgatcagtgtcatgacaccctggtacagtttggt
gggtttttagcatccaatctaagtacagaggattacattaagcgagtgccttctattgac
gttctctgtaatgagtttcacacacctcatgatgctgcatttttcctctcaagacccatg
tatgcacaccatatttcatcaaagtatgatgaactaaaaaaagctgagaaaggaaataaa
cagcagcacaaagttcacaaatacattacatcgtgtgagctggtgatggctcctgttcat
gatgctgtgatttctctgcaccttcccaaggtttgggatgacatcagtcctcagttttac
gctacattctggtctttgacaatgtatgaccttgctgtcccacatagtagctatgacaga
gaagtcaataaactcaaagtccaaatgaaagccatagatgacaatcaggaaatgcctcca
aataaaaagaaaaaagaaaaagaacgttgcacagctcttcaagataagctccttgaagag
gagaagaagcagttggagcatgtgcagagggtgctacagagactgaaactagagaaggat
aactggcttctggcaaagtctaccaaaaatgagactatcacaaaatttttgcagttatgt
atatttcctcgatgcattttttcggcaatcgatgcggtttattgtgctcactttgtagaa
ttggtgcatcagcagaaaactcccaacttctccacacttctttgctatgacagagttttc
tctgatattatatatacagttgcaagttgcactgaaaatgaagctagtagatatggcagg
tttttgtgttgtatgctggagactgtgactaggtggcacagtgacagagtcatatatgaa
aaggaatgtggcaactatccaggtttcctaactatattacgggcaactggatttgatggt
ggaaataaagctgatcaattggattatgagaattttagacatgtggtacacaaatggcac
tataaactaactaaggcttctgtacactgccttgaaacgggggaatacacacatatcaga
aatatcctgattgtgctgaccaaaatccttccctggtatccaaaagtgctgaacctgggc
caagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgat
ctatatgcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgata
cctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagta
caaaatgggccaggtggtgctgggatgcctacatctctcgcaataaatacagttagactg
gaagaaggcactgctgaggagactgataaactaaaggagaagtctcagggtgtggtgaaa
gttattaataaagctgtaaacgctacaccgaaggtgactacaagcaatggaaacagtgct
tctaatagcaaaattattaaggagaaagaggataaagaaaaaagtgggaaggaaaaagat
aaagaaaaaaaagacaagactccagctgccactccagagatgaaggcacttgggaaggat
gggaaagataaacctaaggaagaacgggcaaacaaagatgataaagcaagagagatcaag
gagaaaacgccaaaatcggataaagagaaggaaaaagtcaagaaagaagaaaaagcttca
aaagaagaaaaatccaagacagttgttaccatcattgagtcaaagtcaacatcagaaaag
gagagagaaaaggagccatcgagagaaagagatgtagcgaaggaaatgaaatccaaggaa
aatgctaaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccga
tcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgatactcattcttct
ccgtcacattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaag
cactacattaaccacactactccaacactgtccaagagtaaggagagagaagtggacaag
aaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgacaaggac
aggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattcaact
aaacgacgcaaagaggaaaatgggacaactggttcttcaaaacatagtaaaagtgaaagt
ccatcagattcccctcgcttaaatgaaaaggagaaggagaaaaacaaatcaaaatcttca
ggaaaagagaaaggtgattcaattaaagcagaaaagatggagaagagctcctctggtagc
aaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagacagtact
ggagggaaggaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
