KEGG   Nelumbo nucifera (sacred lotus): 104604006
Entry
104604006         CDS       T04131                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104604006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nnu03041]
    104604006
Spliceosome [BR:nnu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104604006
 Complex B
    104604006
 Complex C
   U2 SnRNP specific factors
    104604006
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 104604006
NCBI-ProteinID: XP_010266513
UniProt: A0A822YUD0 A0A1U8ATP9
LinkDB
Position
Un
AA seq 509 aa
MSSTLLEVTRAAHEEVERFERLIVKDLQREPASNKERLFQNHRVRNMIDTITSTTEKLIE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPVAHVVDAAEQYEELL
KEEPYIEFSGEEAFGRYLDMHELYNEYVNSKFGEAIEYSAYLDVFSQPDKIPCNLKLTRQ
YKEYLEHLLEYLIYFFQRREPLQDLDKMFSKVETEFEELWANGKVEGWESKGQENGDVSA
PDTVIDLDYYSTVEELIEVGPEKLKEALAALGLKTGGTVQQRAERLFLTKHTPLEKLDKK
HFAKGSHLLEKNGAKQASQQKDNFKEIALMEAKMKRLCELLNETIMQTKENVEKKQALTY
EEMEAEREEEEVQADTESDEEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSINEARVLWEKIQERQGLNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcttcgactctgttagaagtgacgagggcggctcacgaggaagtggagcgtttcgaa
cgtctcatagtgaaggatcttcagcgcgagccggcctcgaacaaggaacgcttgttccag
aaccaccgagtccgaaacatgatcgatacgatcacctccacaactgaaaagctcattgaa
atctacgaagataaagataacgcgaggaaggatgaaattgccgctctcgggggtcaaaca
gctactggaaccaatgtgtttagcgcgttttatgacagactcaaagagattcgtgagtat
catagacgccatccagttgcgcatgttgttgacgcagctgagcaatatgaggaattgctc
aaagaagaaccgtacattgagttcagtggggaggaggcttttgggcggtacttggacatg
catgaattatacaatgagtatgtaaattctaagtttggagaggcaattgagtactctgct
tatctggatgtgttttcacagcctgataaaatcccttgcaacctgaaactgacaaggcag
tacaaggagtatttagagcatcttttggagtatttaatatatttttttcagcggagggag
cctttgcaggatcttgataaaatgttttcaaaggttgaaactgaatttgaagagctctgg
gcaaatggtaaggtagaaggatgggaaagtaagggccaagagaatggagacgtttcagct
ccggatactgtaatagatcttgattactacagcacagtggaggaactaattgaagtaggg
cctgaaaaattgaaggaggcactggctgctttaggactgaaaacaggtggtactgttcag
cagcgtgcagaaaggctttttcttacaaagcacacccctctagagaaacttgataaaaag
cattttgctaaaggctcacatttactcgaaaaaaatggtgcaaaacaagcttcccaacag
aaggacaatttcaaagaaattgccctcatggaggcaaagatgaagcggctatgcgaattg
ctaaatgagacaatcatgcaaaccaaagaaaatgttgagaagaagcaagctttgacatat
gaggaaatggaggctgaacgcgaagaggaagaggtacaagctgacactgaaagtgatgaa
gaggagcagcaaatttataatcctctcaagttgccaatgggttgggatggcaagcctatc
ccgtactggttgtataagcttcatggtcttggccaggaattcaagtgcgagatatgtggg
aatcatagttattggggacgtagggcctttgagcgacacttcaaggaatggcgccatcaa
catgggatgcgttgccttggtattccaaacaccaagaacttcaatgaaattacatctata
aatgaagcgagagtgctgtgggagaagatacaagaaaggcaaggattgaataagtggcga
ccagacctggaagaggaatacgaagacaaggagggcaacatctacaacaagaagacatat
actgacctgcaacgccagggactgatctaa

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