KEGG   Nelumbo nucifera (sacred lotus): 104604510
Entry
104604510         CDS       T04131                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03013  Nucleocytoplasmic transport
nnu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104604510
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104604510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104604510
   04131 Membrane trafficking [BR:nnu04131]
    104604510
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104604510
Membrane trafficking [BR:nnu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104604510
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104604510
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104604510
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_Vps41 WDR55 Beta-prop_RIG_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP WD40_RFWD3 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 104604510
NCBI-ProteinID: XP_010267185
UniProt: A0A1U8AIZ1
LinkDB
Position
Un
AA seq 301 aa
MPSQKIETGHQDTVHDVVMDYYGKRLATASSDTTIKIIGVSTSASQHLATLSGHQGPVWQ
VAWAHPKFGSILASCSYDGRVIIWKEGNQNEWTQAHVFDDHKASVNSIAWAPHELGLCLA
CGSSDGNISVFTARADGGWDTTRIDQAHLVGVTSVSWAPSTAPGGLVGPGILEPVQKLVS
GGCDNTVKIWKLQNGSWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGTVVIW
TVAREGEKWEGKVLKDFKTPVWRVSWSLTGNILAVSDGNNNVTLWKEAVDGEWQQVTTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccatcacagaagattgagacgggtcatcaagacaccgttcatgatgtggtcatggat
tactacggcaagcgtctcgctacggcgtcttctgatactaccatcaagatcattggtgtg
agcacctcagcatcacagcatcttgccactctgagtggtcatcaaggccctgtgtggcag
gttgcatgggctcaccccaagttcggctccatccttgcttcttgttcctatgatgggcga
gtaataatttggaaagagggcaaccagaatgagtggactcaagcccatgtctttgatgat
cacaaagcctccgtcaattccattgcatgggctcctcatgaacttggtctctgtttggcc
tgtggatcatctgatggaaacatatcggtcttcactgccagggctgatggtggttgggac
actacaaggattgaccaagctcatctcgttggtgtcacttcagtttcatgggctccatca
acagctcctggaggtcttgttggacctggcattctcgagcctgttcagaagcttgtctcc
ggtggctgtgataatactgtgaagatttggaagctgcagaacggaagttggaagatggat
tgcttccctgcccttcagatgcacactgattgggtgcgggatgtggcttgggcacccaac
ttggggcttccgaagtctaccattgccagtgcttcacaggatgggactgtagtcatatgg
actgtggcgagagaaggggaaaaatgggagggtaaggttttgaaagattttaagacccca
gtttggagagtctcctggtcattgactggaaacatattggccgtgtctgatgggaataac
aatgtaacattgtggaaagaggcagttgatggagaatggcaacaggtgacaacagttgaa
ccatag

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