Actinomadura parvosata subsp. kistnae: BKM31_49505
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Entry
BKM31_49505 CDS
T04759
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa00040
Pentose and glucuronate interconversions
noa01100
Metabolic pathways
noa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BKM31_49505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM31_49505
Enzymes [BR:
noa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BKM31_49505
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Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Beta_helix
Laminin_G_3
Laminin_G_2
Glyco_hydro_59_C
Motif
Other DBs
NCBI-ProteinID:
AQZ68448
UniProt:
A0A1V0AE04
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Position
10957067..10958629
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AA seq
520 aa
AA seq
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MPFIAAAFATALVTALLVMPSASAATLFSDDFQDGDAAGWSRSGGSWSVVTDGSPAYRQS
GTSADARALAGSGWTDQAVQARVKPISYNGSGRYAAVLARAQSTSSYYFLGLTNAGTAVL
GKRTGGAPITLATGSATITPGEWHTVRLEAFGSTLRGFVNDVQVATATDTTFASGRAGLA
GYYASATFDDVLVTDLGGPTVSPTVPTIPPGSCLPPAGSPVGFASVNAWGQNGTTVGAGG
PTVAVDTAAEFLAAIGQQGPLTVCVLGTITLPSGMHNVTSDKTILGVGATSGLTGGGLNI
GLPADDSITTPPANAVHNVIIRNLTFRGATDDSINVQMFSHHIWIDHNDLANGYDGLIDI
KRGSSYITVSWNHTHNHTKNMLLGHDDGNAAQDVGRLKVTYHHNWFDRTPQRNPRVRFGE
PVHVFNNYYVYNTDVGVACQADAGCLVEGNYFERVEEPVTNSYAGPSGRCVARNNVFTDD
SGTPDCSGTVQEPSTYYSYTLADPTTIKTAVMSGAGVGKI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgcccttcatcgccgccgcgttcgccacggccctcgtcacggccctcctggtcatgccg
agcgcgtccgccgccaccctgttcagcgacgacttccaggacggcgacgccgccggctgg
tcccgctccggcggcagctggtcggtggtcaccgacggctccccggcctaccgccagtcg
ggcaccagcgccgacgcccgcgccctggccggcagcggctggaccgaccaggcggtgcag
gcccgcgtcaagccgatctcctacaacggctccggccggtacgccgccgtgctcgcccgc
gcgcagagcaccagcagctactacttcctcggcctgaccaacgcgggcaccgccgtcctc
ggcaagcgaaccggcggcgcgcccatcaccctcgccaccggctccgccaccatcaccccc
ggagagtggcacaccgtccgcttggaagcgttcggcagcacgctgcgcggcttcgtcaac
gacgtgcaggtggccaccgccacggacaccacgttcgcctcaggccgggccggcctggcc
ggctactacgccagcgccacgttcgacgacgtgctcgtcaccgacctcggcggccccacc
gtctcacccaccgtgcccaccatcccgcccggaagctgcctgccgcccgccggctcaccc
gtcggcttcgcctcggtgaacgcctggggccagaacggcaccaccgtcggcgccggcgga
cccaccgtcgccgtggacacggccgccgaattcctcgccgccatcggccagcagggcccc
ctcaccgtctgcgtcctcggcaccatcaccctgccatccggcatgcacaacgtcacctcg
gacaagaccatcctcggcgtcggcgccacctccggcctcaccggcggcggactcaacatc
ggcctgcccgccgacgactccatcaccaccccgcccgccaacgccgtccacaacgtcatc
atccgcaacctgaccttccgcggcgccaccgacgactccatcaacgtccagatgttcagc
caccacatctggatcgaccacaacgacctcgccaatggctacgacggcctcatcgacatc
aagcgcggctcctcctacatcaccgtctcctggaaccacacccacaaccacaccaagaac
atgctgctcggccacgacgacggcaacgccgcccaggacgtcggccgcctcaaggtcacc
taccaccacaactggttcgaccgcaccccgcaacgcaacccccgcgtccgcttcggcgag
cccgtccacgtgttcaacaactactacgtgtacaacaccgacgtcggggtcgcctgccag
gctgatgccggctgcctggtggagggcaactacttcgaacgagtggaggaaccggtcacc
aactcgtacgccggcccttcgggacggtgcgtcgcccgcaacaacgtcttcaccgacgac
tccggaacgcccgactgcagcggcaccgtccaggaaccgtccacgtactactcgtacacg
ctggcagacccgaccacgatcaagaccgcggtcatgtccggcgccggcgtcggcaagatc
taa
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