Nonlabens sp. MB-3u-79: CW736_11335
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Entry
CW736_11335 CDS
T05253
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nob
Nonlabens sp. MB-3u-79
Pathway
nob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW736_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nob03019
]
CW736_11335
03009 Ribosome biogenesis [BR:
nob03009
]
CW736_11335
Enzymes [BR:
nob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CW736_11335
Messenger RNA biogenesis [BR:
nob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW736_11335
Ribosome biogenesis [BR:
nob03009
]
Prokaryotic type
rRNA helicases
CW736_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_RecD
UTP25
CMS1
AAA_19
SNF2-rel_dom
AAA_22
DUF5679
Motif
Other DBs
NCBI-ProteinID:
AUC79917
UniProt:
A0A2K8XAI2
LinkDB
All DBs
Position
complement(2564512..2566536)
Genome browser
AA seq
674 aa
AA seq
DB search
MKNFEALGLTQPLLDGLAEMGFVNPTDIQQQAIPILLKHDGDFIGLAQTGTGKTAAFGIP
LLELMDTSSKDTQALILAPTRELAQQICRQIEAMSQKMGRLNVVPVFGGANIMGQIKDIR
RGAQVIVATPGRLMDLMKRREIKLDALKFLILDEADEMLNMGFREDIDFILSKTDVGRNI
WLFSATMAKEIKKIVDTYMKNPEEVRINREEIVNTNISHQYVQLKARDKTEALRRMLDFD
QDMFGVVFCRTKRDTQQVADELNNNGYSTEALHGDMSQAQRDAAMKRFRNKNLKLLIATD
VAARGIDVEDITHVIHFALPDDPEFYAHRSGRTARAGKKGESIALITKGDMRKLKYMESK
LSIKFDRGEIPALEAITQKRIGRWTENLKAQTVNEKITDELFEEVKASLEDVTKDELIGK
FLTKEFNSIYKRNSITDLNDHSKGREDSGEYRERKPRSRGKEEGMKTYFINLGRKDEMNK
GALLGFVCDVTGITGNDIGRIVLDGAHSFMDVKEEVAPQMEKLNSAERNGRELRANIHEG
EVTESRDRGRGGRDGGGRDSGRGRSGGGGYKGNRDSNSSGGYKGNRDSDSGSGGGFKGRR
SDGGGSSPRGRRDDDSSSGGGFKGRSSRSNDDSSSSTGGFKSRESRPKREDSGSSDSSGE
KKGSRSKFFGSKWD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaattttgaagccttagggcttactcagccgttattagacggccttgctgaaatg
ggatttgtgaatccaacagacattcaacagcaagctattccaatcttgctgaagcacgat
ggagattttataggtctggcgcagaccggtacagggaaaacagcagctttcggtataccg
ttactagagctaatggataccagctcaaaagacacgcaggcattaatccttgccccaacg
cgcgaactagcacaacaaatttgtcgtcagatagaagcgatgtctcaaaaaatgggaaga
cttaatgtcgtacccgtttttggaggagcaaacatcatgggccaaatcaaagacatcaga
cgtggagcacaagtaattgtggcgactccaggacgtcttatggatcttatgaaacgccgc
gagatcaaactcgatgcgttgaagtttttgattcttgatgaagcagatgagatgttgaac
atgggtttccgtgaagacattgactttatcctttctaaaacagacgtaggtcgcaatatc
tggttattctctgctactatggcaaaggaaatcaagaagattgtagatacctacatgaaa
aatcctgaagaggtgcgtatcaaccgcgaggaaattgtaaataccaatatctctcaccaa
tatgttcaattaaaagcacgtgataaaaccgaagctttaagaagaatgttggattttgat
caagatatgtttggtgtggttttctgtcgtacaaaaagagatacacaacaagtcgctgat
gagctcaataacaatggttattctacagaagcactccatggagacatgtctcaagcacaa
cgtgatgcagccatgaaacgttttagaaataaaaatctaaaattattgatagcaacagat
gttgccgctcgtggtattgatgtagaagatataacacatgttattcactttgctttacca
gatgatcctgaattttatgctcaccgttctggtcgtaccgctcgtgcaggtaaaaaagga
gaatctattgccttaattactaaaggtgatatgcgtaaattaaagtacatggagagtaaa
ctttctatcaaatttgatagaggagaaattcctgctttagaagcgattacacagaaacgt
atcggtagatggactgaaaatttaaaagcacaaacagtaaatgaaaaaattactgatgag
ctttttgaagaagtaaaagcaagtcttgaagatgttactaaagatgaattaataggtaaa
ttcttaactaaagaatttaactctatttataaacgcaattcgattactgatcttaatgac
cattctaaaggtcgtgaagatagtggtgaataccgcgagagaaaaccaaggtctagaggt
aaagaagaaggaatgaaaacctacttcattaatttaggtcgtaaagatgaaatgaacaaa
ggagctttattaggctttgtttgtgatgttactggaataactggtaatgacataggtcgt
atcgttttggatggcgctcactcttttatggatgtaaaagaagaagtggctcctcaaatg
gaaaaactcaactctgcagagcgcaatggtcgtgagctaagagctaacatacacgaaggt
gaagtgacagaatctagagatagaggtcgtggcggtagagatggcggtggtagagatagt
ggtcgcggtagaagcggcggtggcggttacaaaggaaatcgtgacagcaactctagtggt
ggttataaaggcaatagagatagtgactccggttccggcggtggcttcaaaggaagacgc
agcgatggcggtggaagcagtcctagaggacgtcgtgatgatgattctagttctggtggt
ggctttaaaggtcgcagctctagatcaaatgatgattctagctctagtactggtggtttt
aaaagccgtgagtctagacctaaaagagaagattctggatcatcagacagctctggagaa
aaaaaaggaagccgttctaagttttttggttccaagtgggactaa
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