Nocardiopsis sp. LDBS0036: UIS43_16365
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Entry
UIS43_16365 CDS
T11195
Name
(GenBank) glycoside hydrolase family 9 protein
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00500
Starch and sucrose metabolism
nocb01100
Metabolic pathways
nocb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
UIS43_16365
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UIS43_16365
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
UIS43_16365
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CelD_N
CBM_2
CBM_4_9
Pec_lyase
CBM49
Motif
Other DBs
NCBI-ProteinID:
XEA83832
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Position
3876579..3879173
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AA seq
864 aa
AA seq
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MSPARRNRAAALGAAAALGTSLLVASPAQADDEPVEQITNGDFSDGTTGWWATEGIDLAV
SEDGALCVAVPGGTSDPWDQIVGQNDIPLVAGESYSLTFTASGADGLPVRALVQEPVDPW
RTELDERPVLTPTATGYEYVFTASAEMADAQLAFQIGGAEEDWTFCLDDVSLLGGAEPPV
YEPDTGPRVRVNQVGYLPQGPKNATVVTDAEEALPWRLADAGGAVVAEGDTVPYGLDESS
GQNVHTVDFSGFTGTGEGYTLTADGETSHPFGITADPYAALATDALDFYYTQRSGIEILD
ELAPGYGREAGHAGVEPNQGDTDVTCHPSAPCDYSLDVSGGWYDAGDHGKYVVNGGISVH
QLMSVYERAHTAPTGDPARVADSTLSVPERDNGVPDVLDEARWEMEFLLSMRVPEGEELA
GMAHHKVHDERWTGLPLLPSEDPQPRYLHPPSTAATLNLAATAAQCSRVFAPYDADFAAT
CLEAAETAWDAAVAEPERYATVGGEGGGAYDDDNVADEFYWAAAELYLATGHGDYEEAVV
SSELHTADVFTSAGFDWRWTAPLGRLQLATVPSGLDGRDEVRASVVEGAEQYLADVSEHP
YGLAYDPEGGVFAWGSNNLVLNNMVVMASAYDIGGDTRFRDAVLEGMDYILGRNALNQSY
VTGYGENDAVNQHSRWYAHQLDPRLPNPPEGTLSGGPNSDTGTWDPVAQSNLDGCAPQFC
YIDHIDSWATNELTINWNSTLAWVSGFVADQGDASLPAGSSCEVDYVVHGEWHDRFNTQV
TVRNTGDEPVNGWKLVWSFPGGQTVERHWSSALEQAGHAVTAVNADWNGTIEPGDEVTFG
FIGTLASGANAVPARFALNGSVCS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
ttgagtccggcacgaagaaaccgcgcggcggcgctcggcgccgcagccgcactcggcacg
agtctcctcgtcgcctcccccgcccaggccgacgacgaaccggtcgagcagatcaccaac
ggcgacttctccgacggcaccaccggttggtgggcgaccgaggggatcgacctcgccgtc
agcgaggacggagccctgtgcgtcgcggtccccggcggcaccagcgacccgtgggaccag
atcgtcggccagaacgacatccccctcgtggcgggggagtcctactccctcacgttcacc
gcctccggcgccgacggcctgcccgtccgcgcgctggtccaggagcccgtcgacccctgg
cgcaccgaactggacgagcgccccgtgctcacgccgacggcgaccggctacgagtacgtc
ttcaccgcgtcggccgagatggccgacgcccagctcgccttccagatcggcggggccgag
gaggactggacgttctgcctggacgacgtgtcgctgctcggcggcgccgaaccaccggtc
tacgaacccgacaccggcccgcgcgtccgcgtcaaccaggtcggctacctcccgcagggc
cccaagaacgccaccgtggtcaccgacgccgaggaggccctgccctggcggctggccgac
gccgggggcgcggtcgtggccgagggcgacaccgtgccgtacggcctggacgagtcctcc
gggcagaacgtgcacaccgtcgacttcagcggcttcaccgggacgggcgagggctacacc
ctgaccgccgacggcgagaccagccaccccttcggcatcaccgccgacccctacgccgcc
ctggccacggacgcactggacttctactacacccagcgcagcggtatcgagatcctcgac
gaactcgcccccgggtacgggcgcgaggccgggcacgcgggcgtggagcccaaccagggc
gacaccgacgtcacctgccacccctcagccccgtgcgactactcgctcgacgtgtccggc
ggctggtacgacgcgggcgaccacggcaagtacgtggtgaacggcggcatctccgtccac
cagctgatgagcgtctacgagcgcgcgcacaccgcgcccaccggcgaccccgcccgggtc
gccgactccaccctgtccgtccccgagcgggacaacggcgtgccggacgtcctggacgag
gcccgctgggagatggagttcctgctgtccatgcgggtccccgagggcgaggagctcgcg
gggatggcccaccacaaggtccacgacgagcgctggaccggcctgcccctgctgccctcc
gaggacccccagccccgctacctgcacccgccgtcgacggcggccacgctgaacctggcc
gcgaccgccgcccagtgctcccgcgtgttcgccccctacgacgccgacttcgccgcgacc
tgcctggaggcggccgagaccgcctgggacgccgcggtggccgaacccgagcgctacgcg
accgtcggcggcgagggcggcggcgcctacgacgacgacaacgtggccgacgagttctac
tgggccgccgcggagctgtacctggctaccgggcacggggactacgaggaggcggtggtc
tcgtccgagctgcacaccgccgacgtgttcacctccgccgggttcgactggcgctggacg
gcccccctgggccgcctccagctcgccaccgtgccgagcgggctcgacgggcgcgacgag
gtccgcgcctccgtcgtggagggggccgagcagtacctggccgacgtctcggagcacccc
tacggactggcctacgaccccgagggcggggtcttcgcctggggctccaacaacctcgtg
ctcaacaacatggtggtgatggccagcgcctacgacatcggcggcgacacgcgcttccgc
gacgcggtcctggagggcatggactacatcctgggacgcaacgccctcaaccagtcgtac
gtgaccgggtacggcgagaacgacgcggtcaaccagcacagccgctggtacgcccaccag
ctcgacccgcgcctgcccaacccgcccgagggcaccctgtccggcgggcccaactccgac
accggcacctgggacccggtcgcccagtccaacctggacgggtgcgccccccagttctgc
tacatcgaccacatcgactcgtgggcgaccaacgagctgaccatcaactggaactccacg
ctggcctgggtgtccggattcgtcgccgaccagggcgacgcctccctgcccgccggctcc
tcctgcgaggtggactacgtggtccacggcgagtggcacgaccgcttcaacacccaggtg
accgtccgcaacacgggtgacgagcccgtgaacggctggaagctggtgtggtccttcccc
ggcggccagaccgtggagcgccactggagcagcgcgctggagcaggccgggcacgcggtg
accgccgtgaacgcggactggaacgggaccatcgagcccggcgacgaggtgacgttcggc
ttcatcggcaccctggcgtccggggcgaacgccgtgcccgcgaggttcgccctcaacggt
tcggtctgtagctga
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