Nocardiopsis sp. LDBS0036: UIS43_19430
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Entry
UIS43_19430 CDS
T11195
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nocb03110
]
UIS43_19430 (clpB)
Chaperones and folding catalysts [BR:
nocb03110
]
Heat shock proteins
HSP100
UIS43_19430 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
AAA_18
nSTAND3
TniB
AAA_7
IstB_IS21
Mg_chelatase
bpMoxR
AAA_14
T2SSE
NACHT
AAA_19
NBD_SMAX1
ABC_tran
Zeta_toxin
HOOK
AAA_23
AAA_25
ZapB
DNA_pol3_delta2
Mis12
ABC_tran_CTD
Mod_r
Motif
Other DBs
NCBI-ProteinID:
XEA84394
LinkDB
All DBs
Position
complement(4580793..4583408)
Genome browser
AA seq
871 aa
AA seq
DB search
MNYKLTKKSQEALSVAIRRATTDGSPQTEPVHLLAALLDQAEGITRPLLKEVGANPDALR
DKVEAAVGALPKAAGSTVSSPSSSRQLIVSINTAAQRAQQMEDEYVSTEHLLVGLAADGG
EASKLLTEAGATPDALLEGFERVRGSGKVTSENPEDTYQALEKYGVDLTERAREGKVDPV
IGRDGEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPQSLVGKRLVSL
DLSAMVAGAKYRGEFEERLKAVLSEIKESEGQVITFIDELHTMVGAGAAEGAMDAGNMLK
PMLARGELRMVGATTLDEYREKIEKDPALERRFQQVMVGEPSAADTIAILRGLKGRYEAH
HKVQIADSALVAAATLSDRYITARFLPDKAIDLIDEAASRLRMEIDSSPVEIDELQRTVD
RLKMEEMALDKESDPASRQRLERLRADLADRQEQLNGLVARWEQEKAGLNRVGELKGQLD
DLRTRAELAQREGDFGEASRLMYGDIPQLEKQVEEASRDEERAASRGDAAMVKEEVGADE
VADVVSAWTGIPVGRLMEGETSKLLRMEDELGRRLIGQKDAVAAVSDAVRRARAGISDPD
RPTGSFLFLGPTGVGKTELAKALAEFLFDDERAIVRIDMSEYSEKHSVSRLVGAPPGYVG
YEEGGQLTEAVRRRPYTVVLLDEVEKAHLEVFDTLLQVLDDGRLTDGQGRQVDFRNTILI
LTSNLGSQFLVDQSLEESVRRDRVLDVVRATFKPEFLNRLDDVIMFDALSTEDLTRIVDL
QIDKLARRLADRRLGLEVTEGAREWLALTGYDPNYGARPLRRLVQSSIGDPLARELLSGD
LAEGATVVVDVDEGADRLRVTSRGAEEAPVA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaagctcactaagaagagccaggaggccctgtcggtggcgatccgccgggcc
accacggacggcagtccgcagacggagcccgtgcacctgctggcggccctgctggaccag
gcggagggcatcacccgcccgctgctcaaggaggtcggggccaacccggacgcgctccgg
gacaaggtcgaggcggccgtcggcgcgctgcccaaggcggccggttccacggtcagctcg
cccagctcctcgcgccagctgatcgtctccatcaacaccgcggcccagcgcgcgcagcag
atggaggacgagtacgtctccaccgagcacctgctggtggggctggccgcggacggcggc
gaggcgtcgaagctgctcaccgaggccggtgccacccccgacgcgctcctggaggggttc
gagcgggtgcgcggctcggggaaggtgacctcggagaacccggaggacacctaccaggcc
ctggagaagtacggggtggacctgaccgagcgggcccgtgagggcaaggtggacccggtg
atcggccgcgacggcgagatccggcgggtcgtccaggtgctcagccgccgcaccaagaac
aaccccgtgctcatcggtgagccgggcgtgggcaagaccgcggtcgtggagggcctggcc
cagcggatcgtggccggtgacgtgccgcagtccctggtgggcaagcgcctggtgagcctg
gacctgtccgcgatggtggcgggcgccaagtaccggggcgagttcgaggagcggctcaag
gcggtgctctcggagatcaaggagtccgagggccaggtcatcacgttcatcgacgagctg
cacacgatggtgggcgccggcgcggccgagggcgccatggacgcgggcaacatgctcaag
cccatgctggcgcgcggtgagctgcgcatggtgggcgcgaccaccctggacgagtaccgg
gagaagatcgagaaggaccccgcgctggagcggcgcttccagcaggtcatggtgggcgag
ccctcggccgcggacacgatcgcgatcctgcgcgggctcaagggccgctacgaggcgcac
cacaaggtgcagatcgccgactcggccctggtggccgccgcgaccctgtccgaccgctac
atcacggcgcggttcctgccggacaaggcgatcgacctcatcgacgaggcggcgtcccgg
ctgcgcatggagatcgactccagcccggtggagatcgacgagctccagcgcaccgtggac
cgcctgaagatggaggagatggcgctcgacaaggagtcggacccggccagccgccagcgg
ctggagcggctgcgcgcggacctggccgaccgccaggagcagctcaacgggctcgtggcc
cgctgggagcaggagaaggccggcctcaaccgggtcggcgagctcaaggggcagctcgac
gacctgcgcacgcgggccgagctggcccagcgcgagggcgacttcggcgaggcctcccgg
ctgatgtacggggacatcccgcagctggagaagcaggtcgaggaggccagccgggacgag
gagagggcggccagccggggcgacgccgccatggtcaaggaggaggtgggcgccgacgag
gtcgccgacgtggtgtcggcgtggaccggcatccccgtggggcgtctgatggagggcgag
acctccaagctgctgcgcatggaggacgagctgggcaggcgcctcatcgggcagaaggac
gccgtggccgcggtgtcggacgcggtgcggcgtgcgcgggcgggcatctccgacccggac
cggccgacggggtcgttcctgttcctgggccccacgggcgtgggcaagaccgagctggcc
aaggcgctggcggagttcctcttcgacgacgagcgcgcgatcgtgcggatcgacatgagc
gagtactccgagaagcactcggtgtcgcggctggtgggcgcgccccccggttacgtgggg
tacgaggagggcggccagctgaccgaggccgtgcgccgccgcccgtacacggtggtgctg
ctggacgaggtggagaaggcgcacctggaggtgttcgacaccctgctccaggtgctggac
gacggccgcctgaccgacggccagggccgtcaggtggacttccgcaacaccatcctcatc
ctcacctccaacctggggtcgcagttcctggtggaccagtcgctggaggagtcggtgcgc
cgcgaccgcgtgctcgacgtggtgcgcgcgacgttcaagccggagttcctcaaccggctg
gacgacgtgatcatgttcgacgcgctgtccaccgaggacctgacgcggatcgtggacctg
cagatcgacaagctggcccggcggctggcggaccggcggctggggctggaggtgacggag
ggcgcccgtgagtggctggcgctgaccggctacgaccccaactacggcgcgcgtccgctg
cgccgcctggtgcagtcctcgatcggcgacccgctggcgcgcgagctgctgtcgggcgac
ctggccgagggcgccaccgtggtggtggacgtggacgagggcgcggacaggctccgggtg
acctcgcgcggcgccgaggaggcaccggtggcctga
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