Candidatus Nanohalococcus occultus: SVXNc_0656
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Entry
SVXNc_0656 CDS
T10160
Symbol
eRF1
Name
(GenBank) Peptide chain release factor eRF1
KO
K03265
peptide chain release factor subunit 1
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SVXNc_0656 (eRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nocc03019
]
SVXNc_0656 (eRF1)
03012 Translation factors [BR:
nocc03012
]
SVXNc_0656 (eRF1)
Messenger RNA biogenesis [BR:
nocc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
SVXNc_0656 (eRF1)
Translation factors [BR:
nocc03012
]
Eukaryotic type
Release factors
SVXNc_0656 (eRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
DUF4404
Motif
Other DBs
NCBI-ProteinID:
WEL19670
UniProt:
A0ABY8CG06
LinkDB
All DBs
Position
582997..584232
Genome browser
AA seq
411 aa
AA seq
DB search
MSEEKSNSMNKYQLKKLIKKLEGIRGRNTELVSLYIPAGYDMSKISDFVTSEASEAESIK
SKHTRKNVQGALEKIARKVSEEHETPENGVVLFAGNVSETEGRPDIQIWEVHPPQTIESR
RYRCDKEFVLEPLKQMIVDDRVYGLIVLDKNEAAIGYLQGSSIKTEYKMSSEVPGKTRAG
GQSAQRFARIRKQMLKTFMKDINDNAKTAFLEKAREGKLLGILVGGPGWTKDKFVDEYMH
QELKDELIDVKSLNYSGEEALEELVEKAEESLQDASAVKEKNLVESFFENLKEENGKSEY
GLKQVIKAMDMGAVDTVLISEDFNHYRATYICGNEHEKEVYEEEAKISENVKCDECGEQM
DLEQMTDIVDIMDEKAEQMGSSLELISTDHEQGRRLYNMGGIAAILRYRIR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaaatctaactcgatgaacaagtaccagctgaaaaagttgatcaagaag
ctggaaggcatccgcggacggaacacggagctagtatcgctttacatcccggcaggatac
gacatgtcgaagatttctgactttgttacttccgaggcttccgaggccgaatcgatcaag
tccaaacacacccggaaaaacgtacagggagcattggagaagatcgcacgtaaggtctca
gaagaacacgagacaccggaaaacggagtggtgcttttcgccggaaacgtcagcgaaacg
gagggtcgtccggatatccagatctgggaggttcatccgccgcagacaatcgagtccaga
aggtacagatgcgacaaggagttcgtactggagccgttaaaacagatgatcgtagacgat
agagtctacggactgatcgtgctggataaaaacgaggcggcgatcggatacctccagggt
tcctcgatcaagacagagtacaagatgtcttcggaagtaccggggaagacccgggcagga
ggacagtcagcccagagattcgcccgtatacgaaagcagatgctgaaaaccttcatgaag
gatatcaacgacaatgcgaaaaccgctttcctggaaaaagcccgtgaaggcaagcttctc
ggcattctcgtcggaggaccgggatggaccaaagacaagtttgtcgatgagtacatgcac
caagagctgaaagacgagctgatcgatgtaaagtccttgaactactcgggagaggaagcg
ctggaagaactcgtagagaaggccgaagagtcacttcaggatgcttccgcggtaaaggaa
aagaacctggttgaaagcttcttcgagaacctgaaagaggaaaacgggaaatccgagtac
ggactcaagcaggtcatcaaagccatggacatgggtgcggttgatactgttttgatcagc
gaagatttcaaccattaccgtgcgacctacatctgtgggaacgaacacgaaaaagaggtc
tacgaggaagaagccaagatcagcgagaacgtaaaatgcgatgaatgcggcgaacagatg
gacctcgagcagatgaccgacatagtcgatataatggatgaaaaagccgaacagatggga
agcagcctagagttaatatctaccgaccacgaacagggccgccggctctacaacatggga
ggtatcgcagcgattctaaggtaccggatccgctaa
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