Neobacillus oceani: V1499_00705
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Entry
V1499_00705 CDS
T11220
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
noce Neobacillus oceani
Pathway
noce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V1499_00705 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noce03021
]
V1499_00705 (rpoB)
03400 DNA repair and recombination proteins [BR:
noce03400
]
V1499_00705 (rpoB)
Enzymes [BR:
noce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V1499_00705 (rpoB)
Transcription machinery [BR:
noce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V1499_00705 (rpoB)
DNA repair and recombination proteins [BR:
noce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V1499_00705 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XOL51338
LinkDB
All DBs
Position
134227..137787
Genome browser
AA seq
1186 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTYAAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTDSIEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLASVGRYKINKKLHIKNRLFGQRLAEALVDPETG
EIIAEVGTLLDRRNLDRIIPHLEKNINMDSYEPGGGVVDGEIVLQGIKIFAPTDDNEKVI
NILSNAYVPEQVKNITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTATITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFG
FIETPYRRVDPETGKVTDRIDYLTADEEDLYVVAQANARLDEDGSFIDEDIVARFRSDNT
VVPRERVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEHVSAKDSGAAVICKHEGIVEHVEAREVWVRRVQEIDGQEVKGDLDKYRMLKFIRSNQG
TCYNQRPIVSVGDRVTKGEILADGPSMEKGELALGRNVLVAFLNWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRTGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGSPVDIMLNPLG
VPSRMNIGQVLELHLGMAARALGIHVASPVFDGATEEDVWATIEEAGMARDAKTVLYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGLD
VKILSGDEEEIEMRDLEDEDDMQQVDTLTIAPETQSFESEKVGSKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgaagaagttacgcgcgaatc
agtgaagttttagaattaccaaatcttattgaaatccaaacctcttcttatcaatggttt
cttgatgagggactgcgtgaaatgttccaggatatttcaccgattgaagactttactggt
aacctatctctagaatttattgattatagccttggcgatccgaaatattccgttgaggaa
tcgaaggaacgggatgtaacatatgcggcaccgctgcgtgtaaaagtgcgtctcgtcaac
aaagaaacaggggaagtaaaggaccaggatgttttcatgggcgatttcccgctaatgaca
gaaacaggcacctttgttattaatggtgcggaacgtgtcatcgtttcccagctagtacgc
tcccctagcgtctactacagcgggaaagtggataaaaacgggaaaaaaggttttacagcc
accgttataccgaaccgcggcgcttggcttgaatatgaaacagatgccaaggatgtcgta
tacgtaaggatagatcgtacccggaagctgccagttacggttcttttgcgtgcactcggg
ttcggctctgatcaagaaatcatcgatctcattggtgacaatgagtatatccgcaatacg
ctcgaaaaggacaataccgacagcatcgaaaaagcgctgcttgaaatttatgagaggctc
cgcccaggtgaaccgcctacggtggaaaacgccaagagcctgctcgtttcgcgtttcttc
gaccctaaacgatatgacttggcaagtgtagggcgctataaaatcaacaaaaagcttcat
attaaaaaccggctgtttggccagcggcttgctgaagcattggttgatccggaaaccggc
gagatcatcgctgaagttggaacgttgcttgaccggaggaatcttgacagaatcattccc
caccttgaaaagaacatcaacatggacagctacgagccagggggcggagtggtcgatggt
gagatcgtccttcagggaatcaagattttcgcgccaaccgatgataacgaaaaagtaatt
aatattttaagcaacgcctatgtgccggaacaggtaaagaacattaccccggcagatatc
attgcttcaatcagctatttcttcaacctccttcatggagtgggtgatacggacgatatc
gaccaccttggaaaccgccgcctccgttctgtaggggaattactgcagaaccagttccgg
atcggtctttccagaatggagcgtgtagtccgtgagcggatgtcgatccaggatacagcg
actatcactccgcagcagctgatcaatatccgtccggttattgcttcaattaaagagttc
ttcggaagctcccagctttcacagttcatggaccagacgaacccgcttgccgaattgacg
cataaacgccgtctatcagcactcgggcctggtggtttgactcgtgagcgcgccggcttc
gaagttcgtgacgttcactattcccactacgggcgtatgtgtccgattgaaacgccggaa
ggtccgaacatcgggttgattaactcgctttcatcttatgcgaaggtgaaccgtttcggt
tttattgaaactccgtaccggagggtagatcccgaaacaggaaaagtgacggatcgcatc
gactatctgaccgccgatgaagaggacctttacgtagtcgcccaggcgaacgcaaggctt
gatgaggatggctcgttcatcgatgaggacatcgttgctcgtttccgaagcgataatacg
gtagtcccaagagaacgcgtcgattatatggatgtatcgccaaagcaggttgtatccgca
gcgactgcgtgcatcccgttccttgaaaatgacgactccaaccgcgccctgatgggagcg
aacatgcaacgccaggctgttccgttgatgcagccggaagctccaagggttggtacaggt
atggagcacgtttccgcgaaagactccggagctgccgtcatttgcaaacacgaaggaatt
gttgagcacgttgaagcccgtgaagtttgggttcgccgtgtccaggaaattgatggccag
gaagtaaaaggcgacctcgataaatataggatgcttaaatttatccgctcaaaccaggga
acatgctacaaccagcgtccgattgtttctgtaggcgacagggtaaccaaaggtgaaata
ctggccgatggaccatctatggaaaagggcgaactggctcttggccggaacgtgctggtt
gctttcctgaactgggacggctacaactatgaagatgccatcatcatgagcgaacggctt
gtaaaggatgatgtgtatacatccatccatattgaagaatatgaatccgagtcccgcgat
acaaagctggggcctgaagaaataacacgcgatatcccgaacgttggggaagatgcactt
cgaaaccttgatgagcgtggaatcatccgtacaggcgcggaagtcaaggacggcgatttg
cttgttggtaaagttacgcctaaaggggtaaccgaattgacagcggaagaacgtctgctt
catgcgattttcggtgaaaaggcacgtgaagtaagggatacttccctccgtgttccacac
ggcggcggcggtattgtcctggatgttaaagtgttcaaccgtgaagacggtgatgaactt
cctccgggcgtgaaccagctcgtccgtgtgtatatcgtccaaaaacgtaaaatctccgaa
ggggacaaaatggcaggacgccacggaaacaaaggggttatttcccgaattcttcctgaa
gaagatatgccttatcttccggacggctcacctgtggacatcatgcttaacccactgggt
gtaccatcccgtatgaacatcggccaggtattagaactccatctcggaatggccgcaagg
gcgcttggcattcatgttgcatcgccagtattcgacggtgcgaccgaagaagatgtatgg
gcgactatcgaagaagctggcatggcccgcgacgcgaagactgtcctatacgacggccga
actggcgagccatttgacaaccgggtttctgtcggtgtcatgtacatgattaaacttgct
cacatggttgacgataaactgcacgcccgttccacaggcccatactctctcgtaacacag
cagccgcttggcggaaaagcccagttcggcggacagcgtttcggggagatggaagtttgg
gcgcttgaagcgtacggcgctgcctatacgcttcaggaaatccttactgtcaaatccgat
gatgtggtcggccgtgtaaaaacgtacgaagccatcgtaaaaggcgaaaacgtaccggaa
ccaggtgttcctgagtcattcaaagtattgattaaagagcttcaaagccttggacttgat
gtaaaaatcctgtccggtgatgaagaagaaatagaaatgcgcgaccttgaagacgaggat
gatatgcagcaggtcgatacattgaccattgctcctgaaacacaaagcttcgaatctgaa
aaagtaggttcaaaagagtaa
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