Nocardioides sp. WV_118_6: ABFU82_14345
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Entry
ABFU82_14345 CDS
T10638
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU82_14345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_14345
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABFU82_14345
DNA repair and recombination proteins [BR:
nocw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFU82_14345
Prokaryotic type
ABFU82_14345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Myb_DNA-binding_2
Motif
Other DBs
NCBI-ProteinID:
XBB70352
LinkDB
All DBs
Position
2945664..2946326
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AA seq
220 aa
AA seq
DB search
MAADWAEALAPVEDRVTALGQFLREENAAGHGYQPAGDNVFRAFRAPLASVRVLIVGQDP
YPNPAHPIGLSFAVDRDVRPLPPSLRNIYQELANDVGVVPPAHGDLTAWTEQGVMLLNRV
LTVRPNVAGSHRNQGWEHVTAAAIQAVVRRAEAGAPVAAVLWGKDAQTLKAHLGPIPWVE
SPHPSPLAAHRGFFGSRPFSRVNALLTERGGQPVDWTLPA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgactgggccgaggcgctggcgccggtcgaggaccgcgtcacggcgctgggt
cagttcctccgcgaggagaacgccgcggggcacggctaccagccggccggcgacaacgtc
ttccgcgccttccgggcgccgctggcgagcgtgcgggtgctcatcgtgggccaggacccc
tatcccaacccggcgcacccgatcgggctgtccttcgcggtggaccgcgacgtccggccg
ctgccgccgagcctgcgcaacatctaccaggagctcgcgaacgacgtgggcgtcgtacct
ccggcgcacggggacctcaccgcgtggaccgagcagggcgtgatgctgctcaaccgggtc
ctcaccgtgcgccccaacgtggccggctcgcaccgcaaccagggctgggagcacgtcacc
gcggcggccatccaggccgtcgtgcgccgtgccgaggcgggcgccccggtggcggccgtc
ctgtggggcaaggacgcccagacgctcaaggcccacctcggcccgatcccctgggtcgag
tcgccgcacccctcgcccctcgcggcgcaccgcggcttcttcggctcccgccccttcagc
cgggtcaacgccctgctcaccgagcgcggcggccagccggtcgactggaccttgccggcc
tga
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