Nocardia otitidiscaviarum: FOH10_24750
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Entry
FOH10_24750 CDS
T06114
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nod
Nocardia otitidiscaviarum
Pathway
nod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nod00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FOH10_24750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nod03021
]
FOH10_24750
Transcription machinery [BR:
nod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOH10_24750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_28
DUF6522
Motif
Other DBs
NCBI-ProteinID:
QDP81453
UniProt:
A0A516NRC2
LinkDB
All DBs
Position
5522605..5523474
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AA seq
289 aa
AA seq
DB search
MNHRAATVSTASISTDAVRDYLRTIGRTALLTAEQEYELGARIARGGPDGRRAADHMVRA
NLRLVVSIAKHYPVPAGWSLLDLVQEGTLGLMRAVEKFEHERGLKFSTYATWWIKQSIGR
ALADRSRTIRLPGHVSEVLNRVVRTGRALSQQPGREATAAEIAAELELEPERVRELMRQG
REPISLHTPVGEDDAELGALIADQAPDPSETVTSGALREQLAKALRTLPEREAQVLALRY
GLDTGEPRTLEEVGRIFGVSRERVRQIEAKAMRTLRQPGRSALLADLLG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccgcgccgcgaccgtcagcaccgcttccatcagcaccgatgccgtccgggat
tacctgcgcacgatcgggcgcacggccctgctcaccgccgaacaggagtacgagttgggt
gcgcgcatcgcgcgtggcggtcccgacggccgccgcgcggcggaccacatggtgcgggcc
aatctgcggctcgtggtctccatcgccaagcactatccggttccggccggatggtcgctg
ctggatctcgtccaggagggcacactcgggctgatgcgggcggtcgagaagttcgaacac
gaacggggactgaagttctcgacctacgcgacctggtggatcaagcagtccatcgggcgt
gcgctggccgaccgcagccgcaccatccgactgccggggcacgtctcggaggtgctcaac
cgggtggtgcgcaccgggcgggcactgtcgcagcagcccgggcgcgaggccaccgccgcg
gagatcgcggccgagctcgaactcgaacccgagcgggtgcgtgagctcatgcgccaaggg
cgagaaccgatttcgctgcacacgccggtgggcgaggatgatgcggagttgggtgcgctc
atcgccgaccaggccccggatccgtcggagaccgtcacctcgggcgccctgcgcgagcaa
ctggccaaggcgctgcggacgctgcccgagcgggaggcgcaggtgctcgcgctgcggtac
gggctggacaccggtgaaccgcgcaccctggaggaggtcggccggatcttcggggtgtcg
cgggaacgagtgcggcagatcgaggccaaggcgatgcggacgctgcgacagccgggacgc
agcgcactgctcgcggatctgctggggtag
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