KEGG   Novosphingobium sp. Gsoil 351: GKE62_09255
Entry
GKE62_09255       CDS       T06443                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
nog  Novosphingobium sp. Gsoil 351
Pathway
nog03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nog00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GKE62_09255 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nog03400]
    GKE62_09255 (xth)
Enzymes [BR:nog01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     GKE62_09255 (xth)
DNA repair and recombination proteins [BR:nog03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GKE62_09255 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QGN54710
UniProt: A0A6I5WTN9
LinkDB
Position
complement(1921805..1922587)
AA seq 260 aa
MISVATWNINSVRLRIDQVARFLTEQAPDVLCLQEIKCRAEQFPYEAFAALGYGHSAVHG
QKGYHGVATVSRLPLKELGRHDWQDNGEARHIGVEVAGKLILENVYIPAGGDIPDREVNA
KFGQKLDFLERMTRWADKLDRPTLIVGDFNIAPLDCDVYDHKALLKVVSHTPQEVETLAR
FRDAHGWVDLGREHIPAPGRSYSWWSYRSWWRQKDQGRRLDHAWASPELARQMTAHRVVE
ETRNWDQPSDHVPLITEFDL
NT seq 783 nt   +upstreamnt  +downstreamnt
atgatctccgtcgccacctggaacatcaactcggtccgtctgcggatcgatcaggtcgcg
cggtttctcaccgagcaggcgcccgatgtgttgtgcctgcaggagatcaagtgccgcgcg
gagcagttcccctatgaagcctttgcagcgctgggctatggccacagcgcggtccacgga
cagaagggctaccacggcgtcgccacggtcagccgcctgccgctgaaggaactgggccgt
cacgactggcaggacaacggcgaggcccgccatatcggggtcgaggttgcgggcaagctg
atcctcgagaacgtttatatccccgcgggcggcgacattcccgatcgcgaggtcaacgcg
aaattcggccagaagctcgatttcctcgaacggatgacccgctgggcggacaagctcgat
cgcccgacgctgatcgtcggcgatttcaacatcgccccgctcgattgcgacgtttacgat
cacaaggcgctgctcaaggtggtcagccacaccccgcaggaagtcgaaacgctcgcccgg
tttcgcgatgcccacggctgggtcgatctggggcgcgagcacatccccgcgcccggacgc
agctactcgtggtggagctatcgctcgtggtggcggcaaaaggaccagggccggcggctc
gaccacgcgtgggcctcgcctgaactggcgcgccagatgaccgcgcatcgcgtggtcgag
gaaacccggaattgggaccagccctcggaccacgtgccgctgatcaccgagttcgatctg
tga

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