Noviherbaspirillum sp. UKPF54: FAY22_03245
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Entry
FAY22_03245 CDS
T06116
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00520
Amino sugar and nucleotide sugar metabolism
nok01100
Metabolic pathways
nok01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
FAY22_03245
Enzymes [BR:
nok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
FAY22_03245
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
QDZ27062
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All DBs
Position
695633..696661
Genome browser
AA seq
342 aa
AA seq
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MKENDSKRILVTGGAGFLGSHLCDYLLAKGHDVLCVDNFYTGSKRNIAHLLVHPRFELLR
HDVTFPLYVEVDEIYNLACPASPVHYQNDPVQTTKTSVHGALNMLGLAKRLKAKILQAST
SEVYGDPQIHPQDECYWGHVNPIGLRSCYDEGKRCAETLFMDYRRQHKLSVKIARIFNTY
GPRMHPNDGRVVSNFIMQALAGQPLTVYGDGAQTRSFCYVGDLIDGLYRLMESPDGFCGP
VNLGNPVEHTMVELAERVIAMCGSGSDIVFQPLPSDDPVRRRPDIALARDMLGWEPAVGL
ADGLERTIDYFRRLQGGGVQEEETAPPYLPQEHAMQEQRLHG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaacgacagcaaacgcatcctggtcaccggcggcgccggctttctcggttcg
cacctgtgcgattacctgctggcgaaaggccacgacgtgttgtgcgtcgataacttttat
accggcagcaagcgcaacatcgcgcacttgctggtgcatccgcgcttcgagctgctgcgc
cacgacgtgacctttccgctgtatgtcgaggtcgatgaaatctacaacctggcctgtccc
gcctcgcccgtgcattaccagaacgatccggtgcagaccaccaagaccagcgtgcacggc
gcgctcaacatgctgggactggccaagcgcctcaaggcgaagatcctgcaggcatccacc
agcgaagtgtacggcgatccgcagatccatccgcaggacgaatgctactggggtcatgtc
aatccgatcggcttgcgctcctgctacgacgagggcaagcgttgcgccgaaaccctgttc
atggattaccggcggcagcacaagctgtcggtaaaaattgcacgcatcttcaatacctac
ggcccgcgcatgcatcccaacgacggccgggtggtctcgaacttcatcatgcaggcgctg
gccggccagccgctcaccgtctacggcgacggcgcgcaaacccggtcgttctgttacgtc
ggcgacctgatcgacggcctgtaccggttgatggagagcccggacggcttttgcgggccg
gtcaatctgggcaatccggtcgagcacacgatggtggagctggccgagcgcgtgatcgcc
atgtgcgggtccggctcggacatcgtcttccagccgctgcccagcgacgacccggtgcgg
cggcgccccgatatcgcgctggcgcgcgacatgctggggtgggaaccggcggtcggactg
gccgacggcctggagcgcaccatcgactatttccgcaggctgcagggcggcggcgtgcag
gaggaggaaacggcgccgccataccttccgcaggagcacgccatgcaggaacaacgattg
catggctga
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