Nostoc sp. NIES-3756: NOS3756_01450
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Entry
NOS3756_01450 CDS
T04170
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
non
Nostoc sp. NIES-3756
Brite
KEGG Orthology (KO) [BR:
non00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
non03016
]
NOS3756_01450
Enzymes [BR:
non01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NOS3756_01450
Transfer RNA biogenesis [BR:
non03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NOS3756_01450
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
BAT51223
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Position
complement(176084..178144)
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AA seq
686 aa
AA seq
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MEKGTLVEFRVQGDRRLGVIDRPDGKTRWFVVDERGQSHSLAPRQFTYTVNGKTYKPTEI
EGFLDEVKPYLDPSSLEVAWELLVEDGEIVTPSQMANLLFSQSDSAPSYAAHCLLSDDKL
YFKQKGDAYEPRTAAQVAERKHQIEVETLKARGQQEFLTRVEQALQGETVDWQRHDRQRL
ETLEKYATLLADIVKVGLNYDSLPRAYPPPAPVLETMNMLGRPATPQGAFQLLVDLGWWS
PTENLFLRRSAIPVQFPSKVLEVAQQRLDFPPTDLDTNRLDLNHLKVYTVDDESTTEIDD
GLSWELLSDGRERLWVHIADPTRYLAPEDDLDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGKVCCALSFGVVLDETGAVEDFTIHPSLIKPTYRLTYEDVDEMLELGVQAEPEIA
AIANWATKRKAWRYNQGAISINMPEAMIKVKNDDISIDILDDSRSRQLVAEMMILAGEVA
ARYGQVHNIPLPFRGQPQPELPPEDELLRLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVPPFTAEELKEVMMSVTSTTQELTMVERQT
NRYWALEYLRRHPEEIWQVTVLMWLREDSNLALILLEDLGLQLPMVFKRSVRLGEQILVK
VSISDPQKDVIQFQEIIYQEAQTAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgtttgggcgtgata
gaccgtccagacggaaagacccgttggtttgtggtggatgaacgtggtcaatcccacagc
ctcgcgcctagacaatttacctatacagttaacggcaaaacatacaagccaacggaaatt
gagggttttctagatgaggtcaagccttatctcgacccctcaagcttggaagtggcttgg
gaattactggtggaagatggagaaatagtcacgccatcgcaaatggctaatctgttattt
tcccaatcagattcagcccccagttatgctgctcattgcctgttatcagacgacaagtta
tattttaagcaaaaaggtgatgcttacgaaccgagaacggcggcgcaagtagcagaacgt
aagcaccaaatagaagtagaaaccctcaaagctaggggacagcaagaatttttaacccgt
gtagaacaagcactccaaggtgaaaccgtagattggcaacgccacgaccgccagcgcctt
gaaactttggaaaaatatgccacactcctagcagacatcgtgaaggttgggctaaactat
gattccctccctcgtgcctatcctcccccagccccagttttagaaacgatgaatatgttg
gggcggccagcaaccccccaaggagcatttcagttattggtagacttgggatggtggagt
ccgaccgagaacttgttcctgcgtcgttcggcaattccagtccagttccctagtaaggtg
ttagaagtggcgcaacagcgtttggatttcccgccaacagatttagatacaaatcgcctc
gatttgaatcacctgaaggtgtacacagttgacgatgaaagcaccacagaaatagatgat
ggactgagttgggaattactctccgatggacgggaaaggttatgggtgcatatcgccgat
ccaacacgctacctagcaccagaagatgatttagacctagaagcaaggaagcgcggtagt
acagtttatttacctacggggatgatccccatgttccctgaagtattagcaactggcccc
atgagtttggtacagggcaaagtttgctgtgctttaagttttggtgtggtcttagatgag
acaggggcagtagaagattttaccattcatcccagtttaattaagcctacctatcgcctc
acctacgaggatgtagatgagatgctggaattaggtgtacaggcagaaccagaaattgcc
gcgatcgccaattgggcaactaagcgtaaagcttggcgatataatcaaggcgcaattagt
atcaatatgccggaggcgatgatcaaagtcaaaaatgacgacattagcatcgacatttta
gacgattctcgctcacgccagttagtagcagaaatgatgattcttgctggggaagtcgct
gcccgttacggtcaagtacacaacatccctttaccattccgtggtcaaccacaaccagaa
ttacccccagaagacgaattactcaggcttcctgccgggtttgtccgcgcctgcgccatg
cggcgttgtatgcccaagagtgaaatgagtattacacctgtgcgtcacgctggtttaggt
ttggatacctacacccaagctacatcacccattcgccgctacagtgacttactcacccac
ttccaactcaaagcccacctccggggtgaagttccgcctttcaccgccgaagaactcaaa
gaagtgatgatgagcgtcaccagtaccactcaagaattgacaatggtagaacggcaaacc
aatagatactgggcattggaatatttgcgccgtcatcctgaagaaatttggcaagtcaca
gtgttaatgtggctgcgagaagatagtaacttagcactgatcctattggaagatttaggc
ttacaattaccgatggtatttaagcgatctgtgagactaggtgaacaaatattagtcaaa
gtaagtatttccgacccgcaaaaggatgtaattcagtttcaagaaattatttaccaagaa
gcacagacagctgctaattga
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