Nostoc sp. NIES-3756: NOS3756_27220
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Entry
NOS3756_27220 CDS
T04170
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
non
Nostoc sp. NIES-3756
Pathway
non03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
non00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOS3756_27220 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
non03019
]
NOS3756_27220 (recQ)
03400 DNA repair and recombination proteins [BR:
non03400
]
NOS3756_27220 (recQ)
Enzymes [BR:
non01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOS3756_27220 (recQ)
Messenger RNA biogenesis [BR:
non03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NOS3756_27220 (recQ)
DNA repair and recombination proteins [BR:
non03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NOS3756_27220 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAT53759
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All DBs
Position
3156846..3158060
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AA seq
404 aa
AA seq
DB search
MNPHKTTAWEEVRTTFKKIWGYEDFRPPQGEIVSSLLSQKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELHQRQQKAALLHSELSTSQRRATLQALEKQQLRLLYL
SPETLLSPPVWERLCQPQLQINGIILDEAHCLVQWGETFRPAYRRLGAVRPALLKHKPPG
TKISIAAFTATADPVAQKTIQTVLQLQQPEVFRLNPYRPNLQPTVRIAWTPRGRKQQLIK
FIQNRPQQTGLIYVRTRRDSEDLAAWLSQMGYATASYHAGLGATERREVENQWLGGKIPF
VVCTCAFGMGINKPDVRWVLHYHAPHLLSEYVQEIGRAGRDGKPAEALTLVSEPTGWLDS
EDKQRQEFFQEKMRSQQQKAQQLIKKLPQQGEINAVTKQFHSSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcacaaaacaacagcttgggaagaagttcgcactacctttaaaaaaatttgg
ggttatgaagatttccgtccgccgcaaggggaaattgttagcagtttattatcccaaaaa
gatgcactaattattatgcctactgggggcggtaaatcaatttgtttccaactacctgca
ttgctacaaacaggtttgactttggtagtttcccctttggtagcgttaatggaaaatcaa
gtgcaagaactacaccaacgccagcaaaaagccgcattactgcacagtgaattatcaaca
tctcaacgccgtgcaacactgcaagcattagagaaacaacagctaagattactataccta
tctcccgaaacattactaagtccgccagtttgggaaagattatgtcagccgcaattgcaa
atcaacggcataatcttagatgaagcccattgtttagtgcagtggggtgaaacctttcgc
ccagcttaccgcagattaggggctgttagaccagcattacttaaacataagccacctgga
accaaaatcagcatcgccgcatttaccgccacagcagaccccgtagcgcaaaaaactatt
caaacagttttacaattacaacaaccagaagtattccgcctcaatccttatcgtcctaat
ttgcagcctaccgtccgcatcgcatggacacctagaggtagaaaacagcaattaatcaaa
tttatccaaaatcgaccccaacagactggcttaatttacgtccgcacaaggcgagatagt
gaagatttagcagcttggttgtcacagatgggttacgccacagctagttatcatgcgggt
ttaggtgcgacagaacgccgggaagtagaaaatcaatggttaggtggaaaaatacccttt
gtggtgtgtacctgtgcttttgggatggggataaacaaacctgatgtgcggtgggttctc
cactatcatgcgccgcacctattatctgaatatgtgcaagaaattgggcgtgcgggacga
gatggtaaaccagccgaggcgctgacattggtgagtgaacctacagggtggttagattct
gaggataaacaaaggcaagaattttttcaggaaaaaatgcgatcgcaacaacaaaaagcc
cagcaattaatcaaaaaattaccacaacaaggtgaaattaacgctgtaactaaacaattt
cactctagtaattag
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