Nocardioides sp. S-1144: FE634_00050
Help
Entry
FE634_00050 CDS
T06354
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
noo
Nocardioides sp. S-1144
Brite
KEGG Orthology (KO) [BR:
noo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noo03032
]
FE634_00050 (gyrB)
03400 DNA repair and recombination proteins [BR:
noo03400
]
FE634_00050 (gyrB)
Enzymes [BR:
noo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FE634_00050 (gyrB)
DNA replication proteins [BR:
noo03032
]
Prokaryotic type
DNA Topoisomerases
FE634_00050 (gyrB)
DNA repair and recombination proteins [BR:
noo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FE634_00050 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QCW52328
UniProt:
A0A5B7RD61
LinkDB
All DBs
Position
7589..9742
Genome browser
AA seq
717 aa
AA seq
DB search
MPETSPETTPETGPEAGSDDVREPRPEDVAQGLRSSTVDAEYGASSIQVLEGLEAVRKRP
GMYIGSTGERGLHHLIWEVVDNAVDESLAGHCDRIVLTLLADGGVRVEDNGRGIPTDTAP
GQELPALTLALTVLHAGGKFGGGGYKVSGGLHGVGISVVNALSSRVIAEVKNRGRRWRQE
FVVGDPSTSLDEVGTMAEGERTGTTITFYPSPDIFETTTFSLETITSRIREMAFLNKGLE
IVVRDERVGADAVAEAVADDTVDNDLDSAGHDALGAGADGGTEQVFKYDRGLVDYVEHLN
RAKTPANPSVIAFEAETPDSQDNHMSLEVAMQWNTTYTESVHTFANTINTHEGGTHEEGF
RAALTSLINNAGADWGLMKKPEDRVSGDDIREGLTAIISIKLGEPQFEGQTKTKLGNTEA
KGFTQRIVNDQLKMWLEQNPSEGKEIVRKAQAAAQARQAAKKARELARSRKGLLGGGGLP
GKLSDCQSNRPEECEVFIVEGDSAGGSARQGRDPRIQAILPIRGKILNVEKARIDKVLGN
TEVQSIISALGTGIQEEYNVDKLRYHKVVLMADADVDGHHINTLLLTLLFRFMRPLIEGG
YVYMAQPPLYRLRWNKPAEHEFVYSDAERDALLRDGVEAGKKLPKENPVQRYKGLGEMNA
KELWETTMDPEQRLMLQVTLDDAAHADEIFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagaccagccccgagacgactcccgagaccggtccggaggccgggtccgacgac
gtccgcgaaccgcggccggaggacgtcgcccaggggctgcgcagctcgaccgtcgacgcc
gagtacggcgcctcctccatccaggtcctcgagggcctcgaggccgtgcgcaagcggccc
ggcatgtacatcggctcgaccggcgagcgcggcctgcaccacctgatctgggaggtcgtc
gacaacgcggtcgacgagtccctcgccggccactgcgaccggatcgtgctgaccctgctc
gccgacggcggcgtccgggtcgaggacaacggtcgcggcatccccaccgacaccgcgccc
ggccaggagctcccggcgctcacgctcgccctgaccgtgctccacgccggcggcaagttc
ggcggcggcggctacaaggtctccggcggcctgcacggcgtcggcatctcggtggtcaac
gcgctgtcgtcgcgggtgatcgccgaggtcaagaaccgcgggcgcaggtggcgccaggag
ttcgtggtcggcgacccctccacgagcctcgacgaggtcggcaccatggccgagggggag
cgcaccggcaccacgatcaccttctacccctcgcccgacatcttcgagaccacgaccttc
tcgctggagacgatcaccagccggatccgcgagatggccttcctcaacaagggcctggag
atcgtcgtgcgcgacgagcgggtcggtgccgacgccgtcgccgaggccgtcgccgacgac
accgtcgacaacgacctcgactccgccggccacgacgcgctcggcgcgggcgctgacggc
ggcaccgagcaggtcttcaagtacgaccgcggcctggtcgactacgtcgagcacctcaac
cgcgccaagaccccggccaacccgagcgtcatcgccttcgaggccgagacgcccgactcg
caggacaaccacatgtcgctggaggtggcgatgcagtggaacacgacctacaccgagtcg
gtccacaccttcgccaacaccatcaacacccacgagggcggcacccacgaggagggcttc
cgcgcggcgctcacctcgctgatcaacaacgccggcgccgactggggcctgatgaagaag
cccgaggaccgcgtctcgggcgacgacatccgcgagggcctgaccgcgatcatctcgatc
aagctcggcgagccgcagttcgagggccagaccaagaccaagctcggcaacaccgaggcc
aagggcttcacccagcgcatcgtcaacgaccagctgaagatgtggctcgagcagaacccg
tcggagggcaaggagatcgtccgcaaggcccaggccgcggctcaggcgcggcaggccgcg
aagaaggcgcgcgagctggcccgctcccgcaaggggctcctcggcggcggcggcctcccg
ggcaagctgtcggactgccagtccaaccggcccgaggagtgcgaggtcttcatcgtcgag
ggcgactcggccggtggctcggcccgccagggccgcgacccgcgcatccaggcgatcctc
ccgatccgcggcaagatcctcaacgtcgagaaggcgcgcatcgacaaggtcctcggcaac
accgaggtgcagtcgatcatctcggccctgggcaccggcatccaggaggagtacaacgtc
gacaagttgcgctaccacaaggtcgtgctgatggccgacgccgacgtcgacggccaccac
atcaacaccctcctgctgaccctgctgttccgcttcatgcgcccgctcatcgagggcggc
tacgtctacatggcccagccgccgctgtaccggctgcgctggaacaagccggccgagcac
gagttcgtctactccgacgccgagcgcgacgcgctgctgcgcgacggtgtcgaggccggc
aagaagctgcccaaggagaacccggtgcagcgctacaagggcctcggcgagatgaacgcc
aaggagctgtgggagaccacgatggaccccgagcagcgcctcatgctccaggtcaccctc
gacgacgccgcgcacgccgacgagatcttctcgatcctgatgggcgaggacgtcgagcag
cgccgctcgttcatccagcgcaacgccaaggacgtccgattcctcgatatctag
DBGET
integrated database retrieval system
