Nostoc sp. PCC 7524: Nos7524_2366
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Entry
Nos7524_2366 CDS
T02363
Name
(GenBank) exoribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nop
Nostoc sp. PCC 7524
Brite
KEGG Orthology (KO) [BR:
nop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nop03016
]
Nos7524_2366
Enzymes [BR:
nop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Nos7524_2366
Transfer RNA biogenesis [BR:
nop03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Nos7524_2366
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AFY48208
UniProt:
K9QS17
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All DBs
Position
complement(2885928..2888060)
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AA seq
710 aa
AA seq
DB search
MDLVAIIELQNLKFICQPIISARVVEKGTLVEFRVQGDRRLGVVDRPDGKTRWFVIDERG
QSHSLAPRQMTYTVNGQTYKPSDIASFLEQVKPYLDPSSLEVAWELLVEEGETVTPSQMA
NLLFSESDSAPCYAAHCLLSDDKLYFKQKGDTYEPRTTTQVAERKHQIEVEALKAREQQE
FLMRVEQALQGEVVEWQRHDRQRLEALEKYAALLADIVRAGVNYDSLARAYPPPAPVLET
MNMLGRHATPQGAFQLLVDLGWWSTNENLFLRRSLIPVQFPSKVLEVAQQRLDYPPIDSD
TNRLDLTHLKVYTIDDESTTEIDDGLSWEILSDGRDRLWVHIADPTRWLAPEDDLDLEAR
KRGSTVYLPTGMVPMFPEVLATGPMSLVQGKICCALSFGIILDADGAVEDFTIHPSLIKP
TYRLTYEDVDEMLELGVEAEPEIEAIANWATKRKAWRYNQGAISINMPEAMIKVKDDDIS
IDILDDSPSRQLVAEMMILAGEVAARYGQKHNIPLPFRGQPQPELPPEQELLQLPAGFVR
ACAMRRCMPKSEMSITPVRHAGLGLDTYTQATSPIRRYSDLLTHFQLKAHLRGEVPPFSA
EQLKEVMMTVTSTTQELTMVERQTNKYWALEYLRRHPEQIWQVTVLMWLREDSNLALILL
EDLGLQLPMIFRRAVSLGEQVLVKVSFSDPRKDMIQFQEIIYQEAQTAAN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttggatttagtagccattattgaactccaaaatctaaaatttatttgtcaaccaatcata
agtgcgagagttgtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgt
ttgggggtagtagaccgtccagacggaaagacccgttggtttgtgatcgatgaacgaggt
caatcccacagcctcgcgcctagacaaatgacctatacggttaacggtcagacctacaaa
ccatctgacattgccagttttttagagcaggtcaagccttatttagacccttcaagctta
gaagtagcttgggaattattggtagaggaaggggaaacagtcacgccgtcccaaatggca
aatttgctgttttctgaatcagactcagcgccttgttacgccgcccattgtttactctca
gatgacaaactctactttaagcaaaaaggtgatacttacgaaccgagaacgacaactcag
gtagcagaacgcaagcaccaaatagaagtagaagctctgaaagctagggaacagcaagaa
ttcttgatgcgtgtagagcaagcactccaaggggaagtagtagaatggcagcgccatgat
cgccaacgtctagaagcattagaaaagtatgcagcactgttggcggatatcgtgcgagca
ggagtaaattatgactcgctggcccgtgcctatcctcctccagcaccagttttagaaaca
atgaatatgttggggcgacacgctacaccccaaggagcttttcaattattggtagacttg
gggtggtggagtacgaatgagaacctattcctgcgtcgttctttaattccagttcagttt
cctagcaaggtattagaagtggcgcaacagcgtttagattacccccccatagactcagat
acaaatcgtcttgatttgactcacctcaaggtctacaccattgatgatgaaagtaccaca
gaaatagatgatggtctgagttgggaaatactttctgatggtagagatagactgtgggta
catattgctgatcccactcgttggttagcgccagaagatgatttagacttagaggctaga
aagcggggtagtacagtatatttgcctacagggatggttcccatgttccccgaagtcttg
gcaactggaccgatgagtttggtgcagggaaaaatctgttgtgccttgagctttgggatt
attttagatgcagatggggcagtagaagactttacaattcatccgagtttaattaaacct
acctaccgcctcacctacgaagatgtagatgagatgctggaattaggggtagaagcagaa
ccagaaattgaagcgatcgccaattgggcaactaagcgtaaagcttggcggtataatcaa
ggcgcgatcagtattaatatgccagaggcgatgattaaagttaaagatgacgacatcagc
atcgacatcttagatgattccccatcgcggcagttagtagcagaaatgatgattctcgct
ggtgaagtagcagcgcgttatggtcaaaaacataacatccccttaccctttcgtggacaa
ccacagccagaattacccccagaacaagaattactccagctaccggcgggatttgtccgc
gcctgtgcaatgcggcgttgtatgcccaagagtgaaatgagtattactcctgtgcgtcat
gctggtttaggcttggatacttacactcaggcgacttctcctatccggcgctacagtgat
ttactcacccattttcaactcaaagcccatttacggggggaagtaccgcccttttccgcc
gaacaactcaaagaagtgatgatgaccgtcaccagtaccactcaagaattaacaatggta
gaacggcaaaccaataaatattgggcgttagagtatttacgccgtcatcctgagcaaatt
tggcaagtaacagtgttaatgtggttgcgagaagatagtaatttagcactcatactgtta
gaagatttaggcttgcagttaccgatgattttcagacgtgcagttagcttgggcgaacaa
gtgttagtcaaagtcagcttttctgacccacgaaaagatatgattcaattccaagaaatt
atttatcaagaagcccagacagcagcgaattag
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