Nostoc sp. UHCC 0870: L6494_26415
Help
Entry
L6494_26415 CDS
T11470
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nosc Nostoc sp. UHCC 0870
Pathway
nosc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nosc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L6494_26415 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nosc03021
]
L6494_26415 (rpoB)
03400 DNA repair and recombination proteins [BR:
nosc03400
]
L6494_26415 (rpoB)
Enzymes [BR:
nosc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L6494_26415 (rpoB)
Transcription machinery [BR:
nosc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L6494_26415 (rpoB)
DNA repair and recombination proteins [BR:
nosc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L6494_26415 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UKO98038
LinkDB
All DBs
Position
complement(6236641..6239940)
Genome browser
AA seq
1099 aa
AA seq
DB search
MITENYIEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYTGKLELHFLGQNYKL
KEPKYSVEESKRRDSTYAVQMYVPTRLLNKETGDIKEQEVFIGDLPLMTDRGTFIINGAE
RVIVNQIVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKLS
AQVLLKALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYRKLRPGEPPTVLGGQ
QLLDSRFFDPKRYDLGRVGRYKLNKKLRLSVPDTLRVLTPQDILAAVDYLINLEYDIGSI
DDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEALTPASLVNPKPLVAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPIE
TPEGPNAGLIGSLATHARVNQYGFLETPFRPVENARVKFDVQPVYMTADEEDDLRVAPGD
IPVDENGYIIGPQVPVRYRQEFSTTTPEQVDYVAVSPVQIVSVATSMIPFLEHDDANRAL
MGSNMQRQAVPLLKPERPLVGTGLEAQGARDSGMVIISRTDGDVTYADATEIRVRPKPNA
PEIKYTLSKYQRSNQDTCLNQKPLVRIGERVVAGQVLADGSSTEGGELALGQNIVVAYMP
WEGYNYEDAILISERLIQDDIYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDALRQLD
EQGIIRIGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKG
RVVDVRLFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPMEDMP
YLPDGSTVDIVLNPLGVPSRMNVGQVFECLLGWAGHTLGVRFKITPFDEMYGEESSRKIV
HGKLQEARDETGRDWVYNPDDPGKIMVYDGRTGEAFDRPVTIGVAYMLKLVHLVDDKIHA
RSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEAL
NAIVKGKAIPRPGTPESFKVLMRELQSLGLDIAVHKVETQADGSSLDVEVDLMADQANRR
TPPRPTYESLSRESLEDDE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgaaaattatattgaacccgcctttttgttgcccgacttgattgaaatccag
cgttcaagctttcgctggtttttagaagaagggctgattgaagaacttaactcctttagt
ccgattacagactacacgggcaaactagaactgcactttttaggacagaactacaagctc
aaggagccaaagtacagcgtagaagaatccaagcggcgggatagcacctatgccgtacaa
atgtatgtccccacccgcctgttgaataaagaaactggggatattaaagaacaagaagta
tttatcggggatctgcctttgatgaccgatcgcggcacgtttattattaacggagcagag
cgggtcattgttaatcaaattgtgcgatcgcctggagtttactataaatcagaaatcgat
aaaaacgggcgacgtacctattcagcttcgctcattcccaaccggggagcatggctgaaa
tttgaaacagaccgtaacgatttggtgtgggtacgcatcgataaaacccggaaactttca
gcccaggtacttttaaaagccctagggttatctgataacgaaatctttgatgccctccgt
caccccgaatatttccaaaaaaccatcgaaaaagaagggcagttttcggaagaagaagcc
ctgatggagttatatcgcaaactccgtcctggtgaaccaccaaccgtattaggcggacaa
caactgctagactcccgatttttcgaccccaaacggtatgacttaggtcgcgtaggtaga
tacaaactcaacaaaaaattgcggttgtcagttcccgacaccttacgcgttctcaccccc
caagacatcttggcagccgtcgattacctgatcaacctagaatatgatatcggtagtatt
gacgacattgaccacttaggcaaccgtcgggtaagaagcgtcggtgaattgctgcaaaac
caagtaagggtaggtttgaaccgcctagaaaggatcattcgggaacggatgactgtatcc
gatgcagaagctctaacccctgcatctctagtcaaccccaaaccattagtagcagccatt
aaagaattctttggctctagccaattaagtcagttcatggatcaaaccaatcccttagca
gaactgacccacaaacgccgtctgtcagccctaggacctggtggtttaaccagagaacgg
gcaggttttgccgtgcgagatattcacccctcccactacgggcgaatctgtcctattgag
acaccagaaggccctaacgctgggttgattggttctttggctacccacgcacgggttaac
cagtacggcttcttagaaactccctttagaccggtggaaaatgcacgggtaaaatttgac
gtgcagccagtgtacatgaccgccgacgaagaagacgacctgcgggtagccccaggagat
attcctgttgatgaaaatggctacattattgggccgcaagtgccagtgcgttatcgccaa
gaattttccaccaccacgccagaacaagtagactatgtggcagtatctccggtacaaatt
gtatcggtagctaccagcatgattcccttcttagaacatgacgacgctaaccgcgccctc
atgggttctaatatgcaacgccaagcagtacccctactgaaaccagagcgtcccttagtc
ggtacaggcttagaagctcaaggtgcgagagactcagggatggtaatcatctcccggact
gacggtgatgtcacctatgcagacgcgacagaaattcgtgtccgtcccaaacctaacgcc
ccagaaatcaagtacaccctttccaagtaccagcgttctaaccaagatacctgtctcaac
caaaaacccttggtgcggattggtgaacgtgtagtagcgggtcaagtcttagctgacggc
tcttctaccgaaggtggagaattggcactgggacaaaatatcgtcgttgcttatatgcct
tgggaaggctacaactacgaagacgcgattttgatttctgagcgattgatccaagatgat
atttacacctcaattcacatcgaaaaatatgaaattgaggcacggcaaaccaagctaggc
ccagaagaaatcaccagagaaattcccaacgtcggggaagatgccctacgtcagttagat
gaacagggaatcattcgcattggggcttgggtagaagctggcgatatccttgtaggtaaa
gttacaccgaaaggagaatccgaccaaccgccagaagaaaaactattaagggcgattttc
ggcgaaaaagcgcgggatgtacgagacaactccctccgtgtacccaacggtgaaaaaggt
cgggtagttgatgtgcgcttatttacccgtgaacaaggggatgagttaccaccaggggct
aacatggtagtccgggtgtatgtagctcagaagcggaaaatccaagtcggtgacaagatg
gcaggtcgccacgggaataaaggaattatttcccgcatcttaccgatggaagatatgcct
tatttgcctgatggttcaaccgttgatatcgtcctcaacccccttggtgtacccagccgg
atgaatgtcggacaagtatttgaatgtcttttaggttgggctggtcatactttgggagtg
cgctttaagattactcccttcgatgaaatgtatggcgaagaatcatctcggaaaattgtg
catggcaaattgcaagaagcacgggatgaaaccgggagagattgggtgtataacccagat
gatccaggcaaaattatggtctacgacggtcggacaggtgaagcctttgaccgcccagtg
actataggcgtggcttatatgctgaaactagtacacctagtagatgataagattcacgcc
cgttctacaggcccctactcactagtaacccagcaacccttgggtggtaaagctcaacaa
ggtggtcagcgatttggggaaatggaagtatgggcattggaagccttcggtgcagcgtat
accttgcaagagttgttgacagtaaaatctgacgatatgcaggggcgcaacgaagcttta
aatgcgatcgttaaaggtaaagcgattcccagacctggaacaccagagtcctttaaggtg
ttgatgcgagagctgcaatccttgggattagacattgctgtacataaagtagagacccaa
gctgatggtagttccttggatgtagaagtcgatttgatggcagaccaagccaacagaaga
acaccacctagaccaacctacgaatcgctttcccgcgagtctttggaagatgacgagtag
DBGET
integrated database retrieval system
