Nonomuraea phyllanthi: GBF35_12210
Help
Entry
GBF35_12210 CDS
T06257
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
now
Nonomuraea phyllanthi
Pathway
now00040
Pentose and glucuronate interconversions
now01100
Metabolic pathways
now02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
now00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GBF35_12210
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBF35_12210
Enzymes [BR:
now01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GBF35_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QFY14169
LinkDB
All DBs
Position
complement(2544397..2545653)
Genome browser
AA seq
418 aa
AA seq
DB search
MAGSDGWNPVRGHRDTPRETGREVLPRDDGWASATTGTTGGSAARPEDVHVVRTRAELVA
ALGDPADNTPRIVYVKGAIDAHTDDDGTPLTCDDYAVDGYSPPAYLAAYDPAVWGRTSVP
SGPLEEARKASYAKMAEHVTIRVGSNVTLIGLGRDAALKSFGVRVSDADNVIVRNLTITD
TSDCFPQWDPTDGADGNWNASFDNVEVSGSTHVWLDHNTLNDGDSPDSGQPSYFGRPYQV
HDGLLDVVRGSNYVTLSWNHLSEHDKVTLIGNTDDPARYGEQDKLKVTVHHNYFEGLGQR
TPRVRFGQVHVYNNYYTGGDTHGYSIGVGFGSQVYAESNAFEGIEASKVLSVFKGTAITA
RNNLVDGAPADLVAAYNAANGASIGSDAGWTPSLFTRVQPPQALHALVPARAGAGRLR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ctggcgggctccgacggctggaaccccgtccgcgggcaccgcgacaccccgcgcgagacc
ggccgcgaggtgctgccccgcgacgacggctgggcctccgccaccaccggcaccaccggc
ggctcggccgcccgccccgaggacgtgcacgtcgtcaggaccagggccgagctggtggcg
gcgctcggcgacccggccgacaacacccccaggatcgtgtacgtgaagggcgccatcgac
gcgcacaccgacgacgacggcacgccgctgacctgcgacgactacgccgtcgacggctac
agcccgcccgcgtacctggccgcctacgaccccgccgtctggggcaggaccagcgtcccc
tcagggcccctggaagaggcccgcaaggcgtcgtacgcgaagatggccgagcacgtcacg
atcagggtcggctccaacgtcacgctcatcgggctcggccgcgacgcggcgctgaagagc
ttcggcgtgcgcgtcagcgacgccgacaacgtcatcgtgcgcaacctcaccatcaccgac
acctccgactgcttcccgcagtgggacccgaccgacggcgcggacggcaactggaacgcc
tccttcgacaacgtcgaggtctccgggtccacgcacgtctggctcgaccacaacacgctc
aacgacggcgacagcccggactcgggccagcccagctacttcggccgcccgtaccaggtg
cacgacggcctgctggacgtggtccgcggctccaactacgtgacgctctcctggaaccac
ctcagcgagcacgacaaggtgaccctgatcggcaacaccgacgacccggcgaggtacggc
gagcaggacaagctcaaggtcaccgtgcaccacaactatttcgaggggctcggccagcgc
acgccgcgggtgcgcttcggccaggtgcacgtctacaacaactactacacgggcggcgac
acccacgggtacagcatcggcgtcggtttcggctcccaggtctacgccgagagcaacgcc
ttcgagggcatcgaggcgtcgaaggtcctgtcggtgttcaagggcaccgcgatcaccgcg
aggaacaacctggtggacggcgccccggccgacctggtggccgcgtacaacgccgcgaac
ggcgcctccatcggctcggacgccggctggacgccgtcgctgttcacccgcgtccagccg
ccccaggcgctgcacgccctcgtcccggcgcgggccggagcgggacgcctgcgctga
DBGET
integrated database retrieval system
