Nonomuraea phyllanthi: GBF35_13885
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Entry
GBF35_13885 CDS
T06257
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
now
Nonomuraea phyllanthi
Pathway
now00040
Pentose and glucuronate interconversions
now01100
Metabolic pathways
now02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
now00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GBF35_13885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBF35_13885
Enzymes [BR:
now01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GBF35_13885
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Motif
Pfam:
RicinB_lectin_2
Ricin_B_lectin
Pectate_lyase_4
CDtoxinA
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QFY07631
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Position
2999366..3000802
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AA seq
478 aa
AA seq
DB search
MNIRATFTVLAVLAAIGLTAAPAQAAAPVDGGVYQLKVTKSGKCLDVVGGSKDNGAQLQQ
WSCSGDAWQRFRVVSAGSGTYTIRNVNSERCVDVPNGAATSGLRLQQWGCGAGDKTNQLW
RFAASGSGTYQVISVASGLCMSDEGASTSSGAAVIQETCTHNSNKQWAFESAGGGGRDWS
DSADGFAATSGNGLSTTTGGAGGATVTVSNYADLVRYATASAPYVIRVNGAITVTPYGTE
IRVASNKTIVGVGTSGHIVNGGFFLGSGVSNVIIRNLTIRDTRMADDDPDDKEYDYDGIQ
MDTAHHVWIDHNTITRMNDGLIDSRKDTSYLTVSWNVLSENNKAFGIGWTDNVTARMTIH
HNWIHDTNQRNPSTDNVAYAHLYNNYLQNVASYGNYSRGATKMVIENSYYDHVKDPYYPD
PTAQLRQSGSICVSCTGKQSTSGSAFTPGSFYAYTLDPAADVPSLLRTYAGPQANIGA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgtgcgacattcaccgtactggccgtgctggccgccatcgggctgacggcc
gcgcccgcgcaggccgccgcccccgtggacggcggcgtctaccagctcaaggtcaccaag
agcggcaagtgcctggacgtggtgggcggctccaaggacaacggcgcgcagctccagcag
tggagctgctcgggcgacgcctggcagcggttccgggtcgtgtccgccgggtcgggcacc
tacacgatccgcaacgtgaacagcgagcgatgcgtcgacgtgcccaacggagcggccacc
tcggggctgcggttgcagcagtgggggtgcggcgccggcgacaagaccaaccagctgtgg
cggttcgccgcctcggggagcgggacgtaccaggtcatcagcgtcgcgagcgggctgtgc
atgagcgacgagggcgcctccacctcctcgggcgccgccgtcatccaggagacctgcacc
cacaacagcaacaagcagtgggccttcgagagcgccggcggcggcgggcgtgactggtcc
gacagcgccgacgggttcgccgccaccagcggcaacggcctgagcaccaccaccggcggc
gcgggcggcgccacggtcaccgtctccaactacgccgacctggtcaggtacgccacggcc
agcgctccgtacgtcatcagggtcaacggcgcgatcaccgtcacgccgtacggcaccgag
atcagggtcgcctccaacaagaccatcgtcggcgtcggcaccagcggccacatcgtcaac
ggcggcttcttcctgggctccggcgtgagcaacgtgatcatccgcaacctcaccatccgc
gacacccgcatggcggacgacgaccccgacgacaaggagtacgactacgacggcatccag
atggacaccgcgcaccacgtctggatcgaccacaacaccatcacgcgcatgaacgacggc
ctgatcgacagccgcaaggacacgagctacctgaccgtgtcctggaacgtgctgtcggag
aacaacaaggcgttcggcatcggctggaccgacaacgtcacggcgcggatgaccattcac
cacaactggatccacgacaccaaccagcgcaaccccagcaccgacaacgtggcgtacgcg
cacctgtacaacaactacctgcagaacgtcgccagctacggcaactactcgcgcggcgcc
accaagatggtgatcgagaacagctactacgaccacgtcaaggacccgtactaccccgac
cccaccgcccagttgcgccagagcgggagcatctgcgtcagctgcaccggcaagcagagc
acgagcggctcggccttcacgcccggctcgttctacgcgtacacgctcgacccggccgcc
gacgtgccgtccctgctcaggacgtacgcggggccgcaggcgaacatcggcgcctga
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