Nonomuraea phyllanthi: GBF35_50665
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Entry
GBF35_50665 CDS
T06257
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
now
Nonomuraea phyllanthi
Pathway
now00040
Pentose and glucuronate interconversions
now01100
Metabolic pathways
now02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
now00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GBF35_50665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBF35_50665
Enzymes [BR:
now01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GBF35_50665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QFY13732
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Position
11081450..11083012
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AA seq
520 aa
AA seq
DB search
MRRAVAPRLVAALAAAATAATVGVALPMFQASAAAGGATGYATANGGTTGGAGGQTVRAT
TGTAIHAALCNRASSSTPITIQVEGTINHGNTSKVSGDSCNTADDKIELKEISNVTIIGV
GNGAVFDQLGIHIRDSSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVRNVWVDHVNLE
ASGGESEGFDGLFDMKDDVQYVTLSYSTLRNSGRGGLIGSSESDRSNGYVTFHHNLYENI
DSRTPLLRGGIAHIYNNHYVNLVKSGINSRAGGRAKVDNNYFEDSKDVLGTFYTDEAGYW
QVSGNIFDNVTWSEPGSENNPAGPDPQSNTSISVPYSYSLDGASCVPDIVRQTAGANKGL
QVSNGNCTPQNPDPTPTPTPTPTPTPTPTPTPTPTPPPSGQNLSIGAGSDGSSKASGTSY
GNVRDGDMSTYWSPTGTTGEISIKWDSATTVSQIVIREASGSAGTIGAWQLLNHDTGAVL
KSGSGAGTIAFSPTSLRKITFKITSSTGTPKVAEFETYAG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagcagtcgcaccgcgactcgtggcggctctggccgcggcggccaccgcggcc
acggtcggtgtggccttgccgatgttccaggcgtcggcggcagccggcggcgccaccggc
tacgcgaccgccaacggcgggaccaccggcggcgccggcgggcagacggtcagggccacc
acggggaccgcgatccatgcggccctgtgcaaccgggccagcagcagcaccccgatcacc
atccaggtcgaggggaccatcaaccacggcaacaccagcaaggtgtccggcgacagctgc
aacaccgccgacgacaagatcgagctcaaggagatcagcaacgtcacgatcatcggggtc
ggcaacggagccgtcttcgaccagttaggcatccacatccgcgactccagcaacatcatc
atccagaacgtcaccgtccggaacgtcaagaagtcgggctcacccacgtccaacggcggt
gacgccatcggcatggagagcggcgtccgcaacgtgtgggtcgatcacgtcaacctggag
gcgtcgggcggggagtcggagggcttcgacggcctcttcgacatgaaggacgacgtccag
tacgtcaccctgtcctacagcaccctccgcaactccggccgcggcgggctcatcgggtcc
agcgagagcgaccgctcgaacggctacgtcaccttccaccacaacctgtacgagaacatc
gactcccgcacgcccctcctgcgcggcggcatcgcccacatctacaacaaccactacgtc
aacctggtgaagtccggcatcaactcccgggccggcgggcgcgccaaggtcgacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgacgaggccggctactgg
caggtcagcggcaacatcttcgacaacgtgacctggtcggagcccggcagcgagaacaac
ccggccgggcctgacccgcagtccaacaccagcatcagcgtcccgtactcctacagcctc
gacggcgccagttgcgtgccggacatcgtccgccagacggccggcgccaacaagggcctg
caggtgtcgaacggcaactgcaccccgcagaaccccgacccgacccccacccccactccc
acgccgacccccacgcccactcccacccccacgcccactcccacccctccgcccagcggc
cagaacctcagcatcggggccggctccgacggctccagcaaggccagcgggacgagctac
ggcaacgtccgcgacggagacatgagcacctactggtcaccgaccggcacgaccggcgaa
atctcgatcaagtgggactccgccacgacggtctcccagatcgtcatccgtgaggcgtcc
ggctccgcgggcaccatcggtgcctggcagctcctcaaccacgacaccggcgccgtcctg
aagtccggcagcggggcgggcaccatcgccttcagcccgacctccctgaggaagatcacc
ttcaagatcaccagctcgacgggtacgccgaaggtcgccgaattcgagacctacgccggg
tag
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