Nocardia sp. CS682: DMB37_32530
Help
Entry
DMB37_32530 CDS
T06040
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
noz
Nocardia sp. CS682
Pathway
noz03030
DNA replication
noz03430
Mismatch repair
noz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DMB37_32530
03430 Mismatch repair
DMB37_32530
03440 Homologous recombination
DMB37_32530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noz03032
]
DMB37_32530
03400 DNA repair and recombination proteins [BR:
noz03400
]
DMB37_32530
Enzymes [BR:
noz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DMB37_32530
DNA replication proteins [BR:
noz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DMB37_32530
DNA repair and recombination proteins [BR:
noz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DMB37_32530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
QBS44122
UniProt:
A0A4P7HA61
LinkDB
All DBs
Position
7157964..7161512
Genome browser
AA seq
1182 aa
AA seq
DB search
MAASSGSFVHLHNHTEYSMLDGAAKISPLFAEAKRLGMNAVGMTDHGNMYGASEFYNSAK
KADIKPIIGIEAYIAPASRFDTKRVLWGDPSQKGDDVSGSGAYTHMTMVAENATGLRNLF
KLSSLASLEGQLGKWARMDEEIIAQYAEGIIATTGCPSGEVQTRLRLGHDREALEAAAKW
QEIFGKENFFLEIMDHGLSIERRVREGLLEIGKKLGIPPIATNDCHYVTKDQSTNHEALL
CIQTGKTLSDPTRFKFDGDGYYLKSAEEMRELWDSEVPGACDNTVAIGERVQSYDDVWEF
RDRMPVFPVPDGEDQNSFLRKEVERGLARRFPDGVPDEYFTRAYFELDVIKQKGFPAYFL
VVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDI
DIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAAIKDSARVLFGQPGFAIADQIS
KALPPPIMAKDISVSGIMDPDHERYKEAAEVRELIGSNPDVAKIYETARGLEGLIRNAGV
HACAVIMSSEPLTDTIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAME
NIKANRGIDLDLDTLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIVAV
LALYRPGPMGMNAHNDYADRKNGRQPISPIHPELEEPLKDILSETYGLIVYQEQIMFIAQ
KVAGYSMGKADALRKAMGKKKLEVLEAEYKGFHAGMTANGFSEAAVKALWDTILPFAGYA
FNKSHAAGYGLVSFWTAYLKANYPGEYMAGLLTSVGDDKDKAAVYLSDCRRLGITVLPPD
VNESELNFASVGKDIRFGLGAVRNVGANVVSSIIAARKEKSKFTDFSDYLNKIDAVACTK
KVTESLIKAGGFDSLGHPRKGLLLIHSDAIDAVMSTKKAEAIGQFDLFGGVDADESVSSV
FNVKVPDDEWESKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTHIPAILEGDIKDGTQ
VTVGGILASVNRRINKNGLAWASAQLEDLAGGIEVLFFPQAYSVYGMDVVEDAVVLVKAR
VSVRDDRISLIANDLAVPDLSSIGVAKPLAVVMSTRMCTPDKISEFKRILSRHPGTADVH
VRHVGAREKTTLLKLDDSLRVTPSSALMGDLKALLGPGCLAV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgtccggatcgttcgttcacctgcacaaccacaccgagtactccatgctc
gatggtgcggccaaaatttcacccctgttcgcggaggcgaaacggctgggaatgaacgcg
gtcgggatgaccgaccacggcaatatgtacggcgcctccgagttctataactcggcgaag
aaggccgacatcaagccgatcatcgggatcgaggcctacatcgcgcccgcctcccggttc
gacaccaagcgcgtgctgtggggcgatccgagccagaagggcgacgacgtctccggttcc
ggcgcctacacgcacatgacgatggtcgccgagaacgcgacagggttgcgcaacctgttc
aagctgtcgtcgctggcgtcgctggagggtcagctcggcaagtgggcgcggatggacgag
gagatcatcgcccagtacgccgagggcatcatcgcgaccaccggctgcccctcgggtgag
gtgcagacccggttgcgcctcggccacgatcgcgaagccctggaggcggcggcgaagtgg
caggagatcttcggcaaggagaacttcttcctggagatcatggaccacgggctgtccatc
gaacggcgggtccgcgagggactgctggagatcggcaagaaactcggcatcccgccgatc
gcgaccaacgactgccactacgtcaccaaggatcagtcgaccaatcacgaagcgctgctg
tgtattcagaccggcaagacgctcagtgacccgactcggttcaagttcgacggtgacggc
tactacctgaagtccgccgaggagatgcgcgagctgtgggactcggaggtgcccggcgcc
tgcgacaacaccgtggccatcggcgagcgggtgcagtcctacgacgacgtctgggagttc
cgcgaccggatgccggtgttcccggtgcccgacggcgaggaccagaattcgttcctgcgc
aaggaagtcgagcgcggactcgcgcgccggttccccgacggggtgcccgacgagtacttc
acccgcgcctacttcgagctcgacgtcatcaagcagaaggggttccccgcctacttcctc
gtcgtcggtgacctcgtctcgcacgcgaaagaggtcggcatccgggtcggccccggccgt
ggttcggcggccggttcgctggtcgcctacgcgctgggcatcaccaatatcgacccgatc
ccgcacggcctgctgttcgagcggttcctgaacccggagcgtccgtccgcgcccgatatc
gatatcgacttcgacgatcgccgtcgcggtgagatggtccgctacgccaccgagaagtgg
ggcagcgaccgggtggcccaggtgatcaccttcggcaccatcaaaaccaaagcggcgatc
aaggactcggcgcgggtgctgttcggtcagccgggtttcgccatcgccgaccagatctcg
aaggcgctgccgccgccgatcatggccaaggacatctcggtgtccggcatcatggacccc
gaccacgagcggtacaaggaagccgccgaggtccgcgaactcatcggcagcaaccccgat
gtcgcgaagatctatgagacggcccgcggactggaaggcctgatccgcaacgcgggtgtg
cacgcctgcgcggtgatcatgtcctcggagccgctcaccgacaccatcccggtctggaag
cgggcccaggacggtgccatcatcaccggctgggactacccgtcgtgtgaggccatcggc
ctgctgaagatggacttcctcggcctgcgcaacctcaccgtcatcggtgacgcgatggag
aacatcaaggccaaccgcggcatcgacctcgacctggacaccctgccgctggacgacccg
gccacctacgaattgctgtcccgcggtgacacactcggtgtgttccagctcgacggtggt
cccatgcgcgacctgctgcgccgcatgcagccgaccggcttcaacgacatcgtcgcggtg
ctcgcgctgtaccgccccggcccgatgggcatgaacgcgcacaacgactacgccgaccgc
aagaacggccgtcagccgatctcgccgatccaccccgagctcgaggaaccgctcaaggac
atcctctcggagacctacggtctgatcgtttaccaagagcagatcatgttcatcgcgcag
aaggtcgccggctactcgatgggtaaggccgacgcgctgcgtaaggccatgggtaagaag
aagctcgaggtgctggaggccgagtacaagggcttccacgcgggcatgaccgcaaacggc
ttctccgaggccgcggtgaaagcgctgtgggacaccatccttccgttcgccgggtacgcg
ttcaacaagtcgcatgccgcgggctacggtctcgtctcgttctggaccgcctacctcaag
gccaactatccgggcgagtacatggccggactgctcacttccgtgggtgacgacaaggac
aaggccgcggtctacctgtcggactgccgccgcctcggcatcacggtgctgccgccggac
gtcaacgagtccgagttgaacttcgcctcggtgggcaaggacatccggttcgggttgggc
gcggtgcgcaacgtcggcgccaacgtggtgtcctcgatcatcgccgcccgcaaggagaag
tcgaagttcaccgacttctccgactatctgaacaagatcgacgcggtggcctgcaccaag
aaggtcaccgaatccctcatcaaggcaggcggattcgactcgctcgggcacccgcgcaag
gggctgctgctgatccactccgacgccatcgacgcggtgatgtccaccaagaaggcggag
gcgatcgggcagttcgatctgttcggcggggtggacgccgacgagtcggtgtcgtcggtg
ttcaacgtgaaggtgcccgacgacgagtgggagtccaagcacaagctggcgctggagcgc
gagatgctgggcctctacgtgtccgggcatccgctcaacggcgtcgagcatgtccttgcg
gcacaatcggatacgcacatcccggcgatcctcgaaggcgacatcaaggacggcacccag
gtgaccgtcggcggcatcctcgcctcggtgaaccggcggatcaacaagaacggcctggcg
tgggcatcggcgcagctggaagatctggccggtggcatcgaggtgttgttcttcccgcag
gcgtactcggtgtacggcatggatgtcgtcgaggacgcggtggtgctggtgaaggcgcgg
gtgtcggtgcgcgacgaccggatctcgttgatcgccaacgatcttgccgtgccggacctg
tcctcgatcggtgtggccaaaccgctggcggtggtgatgtccactcggatgtgtacgccg
gacaagatcagcgaattcaagcgcatcctttctcggcatcccggtactgctgatgtccat
gtccggcatgtgggggcgcgggagaagacgacgttgttgaagctcgatgacagtttgcgg
gttacgccgtcgtcggcgctgatgggtgatttgaaggcgctgctcgggcccgggtgtttg
gccgtttag
DBGET
integrated database retrieval system
