Nothoprocta perdicaria (Chilean tinamou): 112950228
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Entry
112950228 CDS
T07556
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112950228 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npd03019
]
112950228 (EXOSC9)
Messenger RNA biogenesis [BR:
npd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112950228 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SPOUT_MTase
Motif
Other DBs
NCBI-GeneID:
112950228
NCBI-ProteinID:
XP_025898501
Ensembl:
ENSNPEG00000008581
UniProt:
A0A8C6ZDD3
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MKDTPLSNCERRFLLRAVQERKRLDGRQCYDYRNVRISFGADYGCCIVELGKTRVLGQVS
CELVPPKPSRATEGILFVNLELSPMAAPAFEPGRQPELLVKLNRLIERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNITDAACIAGIVALCHFRRPDVSVQGEEITVYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPSEREERVMDGFLVIAMNKHHEICSMQSSGGI
MLLQDQILRCSKIAAVKVVEITELIQKALENDQKVRKEGGKFGFAESIPNQKITAFKMEG
AAVDTKDVEEQVEEIITTADPPSEIFTQPILHTPGTAQIGEGIENAWGELGESEKEEAED
DEGETDATAFEWEKTXVEDTTVTNKAEKDEPIVLSDSEEEEVVILEPQAPPKKTRTQPNL
KQENTSKKTFNKKRKKKSRSXK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtccaactgcgagcggcgctttctcctccgcgccgtgcaggag
cggaagcgcctggacgggcggcagtgctacgactaccgcaacgtgcgcatctccttcggt
gctgactacggctgctgcatcgtggagctgggcaagaccagggttcttggacaagtctcg
tgtgagctcgtgccccccaagccaagtcgggccacggaaggtatccttttcgtcaatctt
gagctctcaccgatggcagcacccgcttttgagcctggcaggcaacctgaactgctggtg
aaactgaacaggctgatagaacgctgcctgagaaactccaagtgtatagatacggagtct
ctctgtgtcgttgctggtgagaaggtttggcaaattcgtgtggacctgcacctgttaaat
catgatgggaacatcactgatgccgcttgcatagcaggaattgtagctttgtgccatttt
cgcagaccagatgtatctgtgcaaggagaggaaataactgtgtacaccccggaggagcgt
gatcctgtccctttgagtatccatcacatgcctatttgtgtcagttttgccttcttccaa
caagggacctacttattggtggatccaagtgaaagagaggaacgggtaatggatggtttc
cttgtaattgccatgaataaacaccatgaaatttgcagcatgcagtctagtggtggaatt
atgctgttacaggatcagattctgagatgcagcaaaatagcagctgtaaaggttgtggaa
ataacagaacttattcagaaggctttggagaatgatcagaaagttaggaaagaaggtggg
aaatttggctttgcagaatctataccaaatcagaagatcactgccttcaaaatggaggga
gctgctgttgatactaaggatgtggaagagcaagtggaagaaatcatcactacggctgat
cctccttccgaaattttcacccaaccaatactgcacacccctgggacagcccaaattggg
gaaggaatagaaaatgcctggggagaactaggagaatccgagaaggaagaagctgaagat
gacgagggtgaaactgatgctactgcttttgaatgggagaaaactraagtggaggatacc
actgttacaaacaaggctgagaaagatgaacctattgtcttgtctgatagcgaagaggaa
gaagttgtcattctggaaccacaggctccaccaaagaaaacaagaacacaacccaacttg
aaacaagaaaatacgagtaagaaaacatttaacaaaaagagaaaaaagaagagtcgctca
tkaaagtga
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