Nothoprocta perdicaria (Chilean tinamou): 112955423
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Entry
112955423 CDS
T07556
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04510
Focal adhesion
npd04512
ECM-receptor interaction
npd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112955423 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112955423 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112955423 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npd04147
]
112955423 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
npd00536
]
112955423 (COL6A2)
Exosome [BR:
npd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112955423 (COL6A2)
Glycosaminoglycan binding proteins [BR:
npd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112955423 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
112955423 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
112955423
NCBI-ProteinID:
XP_025904514
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MFQQAFFLTXLCMVLVPLRAQLDVDVGEFSPSSCAEKRDCPINVYFIIDTSESVALQTVP
IQSLVDQIKRFIPVFINKLENEVYQNQVSITWRFGGLHYSDVVEIYSPLTSSKDTYLTKL
YAINYLGRGTFTDCAISNMTEQIQSQMAPGVNFAVVITDGHVTGSPCGGMKMQAERARDM
GIKLFAVAPSDNVYEQGLREIANLPHELYRNNYAITQKDTLDIDVNTTDRIIQVMKHEAY
GECYKMSCLEIAGPPGPKGYRGQKGAKGNMGEPGSPGLKGRQGDPGIEGPIGYPGPKGVP
GLKGEKREFGSDGRRGAAGLAGRNGTDGQKGRLGRIGPPGCKGDPGDKGPDGYPGDAGDQ
GQRGDEGTKGDPGRPGRSGPPGPPGEKGSPGIPGNAGAQGPPGNKGGRGEPGPPGPKGEP
GRRGDPGTKGSKGSPGAKGERGDPGPEGPRGLPGEVGSKGARGDQGLPGPRGPSGAVGEP
GNIGSRGDPGDLGPRGDAGPPGPKGDRGRPGFSYPGPRGLQGDKGEKGQPGPKGGRGELG
PKGVQGTKGEKGEPGDPGPAGEPGPRGPTGEPGIEGTPGPPGDPGLTDCDVMTYVRETCG
CCDCEKRCGALDIMFVIDSSESIGYTNFTLEKNFVVNVVSRLGSIAKDPKSETGARVGVV
QYSHDGTFEAIKLDDERIDSLSSFKEAVKRLEWIAGGTWTPSALQFAYNKLIKESRREKA
QVFAVVITDGRYDPRDDDKNLGALCGRDVVVNTIGIGDMFDQPEQSETLVSIACNEPQRV
QKMRLFSDLVAEEFIDKMEDVLCPDPQIVCPELPCQTELSVAQCTQRPVDVVFLLDGSER
IGEQNFRKASKFVEEVAQQLTLARSNTDNMNARIALMQYGSEREQDVVFPLTYNLTEISN
ALAQIKYLDSSSNIGSAIIHAINNIVRRPGDTQRVARRNAELSFVFITDGITGSQNLEEA
IDSMKKQDVMPTVLALGSDVDMDVLLKLGLGDRAAIFREKDYASLSQPGFFDRFIRWIC
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcaagccttttttttgactyttctttgtatggtgctagttcctctccgtgct
cagcttgatgtggacgttggagaattcagtcctagctcctgtgcagagaagagggactgc
cccatcaatgtgtacttcatcattgacacttcggagagtgttgctctgcagactgtgccc
atccagagcctcgtggatcaaataaarcggttcatccctgtgtttatcaataagctggag
aatgaggtctaccagaaccaagtctccatcacttggcggtttggaggccttcattactca
gatgtggtggaaatttacagccctctaacgagcagcaaagacacatacctcaccaagctg
tacgctatcaattaccttggccggggcaccttcacagactgtgctatctccaacatgaca
gagcagatccagagccagatggcccctggtgtgaactttgccgtggtcatcacggatggc
cacgtaactggcagtccctgtgggggaatgaagatgcaagctgagagggcacgagacatg
ggcatcaagctctttgcagtggcccccagcgacaacgtctacgagcaggggctgcgggag
attgcgaacctgccacaygagctgtatcgcaacaactatgccatcacccagaaggacacc
ctggacatcgatgtgaacactacggacaggataatccaagtcatgaaacatgaagcctac
ggagagtgctacaagatgagctgcttggagattgcaggtccacctggtcccaagggatat
cgagggcagaagggtgcgaagggcaacatgggtgaaccaggatcccctggactgaagggg
cgacagggcgacccaggtattgaagggccaattggataccctggtcccaagggtgttcca
ggactgaaaggagaaaagagggagtttggatccgatggacgaaggggtgctgctggcttg
gcaggccggaacggcactgatggacagaagggcaggctggggagaattggaccaccaggc
tgtaaaggagaccctggtgacaagggccctgatggctatccaggagatgcaggagaccaa
ggacaaagaggagatgaaggcaccaagggagatcctggccgscctggtcgcagtggacct
ccaggacctccgggggaaaaagggagcccgggtattccgggaaatgctggagcccaagga
cctcctggaaacaagggaggaagaggtgaaccaggacctcctggacctaaaggagagcct
ggtcgacgtggagatccagggacaaaaggcagtaaagggagccccggagccaagggagaa
aggggagatcctggtccagagggtcctcgtggcctgccyggagaggttggaagcaaagga
gcaaggggagatcaaggactgccaggacctagaggtccttcaggtgctgtgggagaacca
ggcaacataggttcacgtggggatcctggtgacttgggaccaagaggtgacgcaggacca
ccaggaccaaagggtgacagaggcagacctggttttagctatcctggccccagaggactg
cagggtgacaagggtgagaaagggcagcctggaccaaagggaggaagaggtgagcttgga
ccaaaaggagtgcaagggacaaaaggagaaaagggggaaccaggtgatcccggcccagca
ggtgagcctggaccccgaggcccwactggtgaaccaggcattgagggaactcccggccca
ccaggagaccctggcctgactgactgtgatgtgatgacctatgtaagagaaacatgtgga
tgctgtgactgtgagaagcgctgtggtgccctggacattatgttcgtcatagacagttca
gagagtattggctacaccaacttcaccctggagaaaaattttgttgtcaacgtggtcagc
cggctgggctctattgccaaggaccccaagtcagaaacaggtgctcgtgttggggtggtg
cagtacagtcatgacgggacctttgaagccatcaaacttgatgatgaacgcatagattca
ctgtcaagcttcaaggaagcagtgaaacgcctagagtggattgctgggggcacctggaca
ccctctgctcttcagtttgcctacaacaagctcatcaaagaaagcagacgagagaaagcc
caagtatttgctgtggtgataacggatgggcgctatgaccctcgagatgatgacaagaac
ctaggggctctttgtggcagagatgtggttgtcaacaccattggcattggggacatgttc
gatcagccagaacagagtgagactctggtctccattgcttgcaatgaaccccagcgagtc
cagaagatgagactcttctcagacctggtggcagaagaattcattgataagatggaggat
gtgctctgcccagatccacagatcgtctgtcctgagctgccctgtcaaacagagctttca
gtggcccagtgcacacagcgccccgttgatgtcgtcttcttgctcgatggctctgaaagg
attggggagcagaatttccggaaggcctccaagtttgtggaggaggtagcccaacagctc
acactagccagaagcaacactgacaacatgaatgccaggattgccctcatgcagtatggc
agtgagagggagcaggatgtggtcttccccctgacgtacaacctaactgaaatctctaac
gccctagcgcagatcaaatatctggattcatcctccaacattgggtcggccatcattcac
gccatcaacaacattgtgcgcaggcctggggacacgcaacgagttgcccggcgcaatgct
gagctctcttttgtctttatcactgatggcatcacaggaagccagaaccttgaggaggcc
attgactccatgaagaagcaggatgtcatgcccacagttttggctcttgggagygatgta
gacatggatgtcttgctgaagcttggcctcggggaccgggcagccatcttycgggagaag
gactatgccagcctctcccagcccggcttctttgacaggttcattaggtggatatgttaa
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