Natrinema pellirubrum: Natpe_1200
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Entry
Natpe_1200 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_1200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_1200
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_1200
Prokaryotic type
Archaeal type
TFB
Natpe_1200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
zf-ribbon_3
Auto_anti-p27
DNA_ligase_ZBD
DZR
Nudix_N_2
OrfB_Zn_ribbon
Sigma70_r4
DZR_2
Trm112p
VGCC_alpha2
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AGB31106
UniProt:
L0JL68
LinkDB
All DBs
Position
1173867..1174844
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AA seq
325 aa
AA seq
DB search
MTDTSIRTYTNEREAETEDETTVSDEQEHCPECGGRLVSDDEHAETVCTDCGLVVEEDEI
DRGPEWRAFDAAEKDEKSRVGAPTTNMMHDQGLSTNIGWQDKDAYGRSLSSRQRQKMQRL
RTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSIE
GVATASLYAAARQAGTPRSLDEISAVSRVEKMELTRTYRYIIRELGLEVKPADPEHYVPR
FVSDLDLSDETERMARELLESARQEGVHSGKSPVGLAAASVYAAALLTNEKVTQNEVSDV
ASISEVTIRNRYKELLEASDTAAPA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacgagcatccgaacctatacgaacgagcgagaggcggagaccgaggacgag
accacggtatccgacgagcaggaacactgccccgagtgtggtggccgactggtttccgac
gacgaacacgccgagacggtctgtacggactgtggcctcgtggtcgaggaagacgagatc
gaccgcggccccgaatggcgtgcgttcgacgctgccgagaaagacgagaagtcccgcgtc
ggcgcgccgacgaccaacatgatgcacgaccaggggctctcgaccaacatcggctggcag
gacaaggacgcctacggccgctcgctctcgagccgccagcgccagaagatgcagcgcctg
cgcacctggaacgagcggttccgaacccgtgactccaaggagcgcaacctcaagcaggcg
ctgggcgagatcgaccggatggcctctgcccttggtctccccgagaacgtccgcgagacg
gcaagcgtcatctaccggcgcgccctcgaggaggacctgctgccgggccgctcgatcgag
ggcgtcgcgaccgcgtcgctgtacgccgccgcccgacaggccggcaccccccgcagtctc
gacgagatttcggcggtcagccgcgtcgagaagatggaactgacccgcacgtaccgctac
atcattcgggaactcggcctcgaggtcaagccggccgaccccgaacactacgtgccccgt
ttcgtcagcgacctcgacctctcggacgaaaccgagcgcatggcgcgtgaactgctcgag
tccgcgcgacaggagggcgtccacagtggcaagtccccggtcggcctcgcggccgcctcg
gtctatgccgccgccctcttgaccaacgagaaggtcacccagaacgaggtcagcgacgtc
gccagtatctccgaggtcaccatccgcaaccgctacaaagaactgctcgaggcctccgat
acggccgcacctgcgtaa
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