KEGG   Neisseria perflava: LPB400_04785
Entry
LPB400_04785      CDS       T07577                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
npf  Neisseria perflava
Pathway
npf02024  Quorum sensing
npf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPB400_04785 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LPB400_04785 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npf03019]
    LPB400_04785 (hfq)
   03036 Chromosome and associated proteins [BR:npf03036]
    LPB400_04785 (hfq)
Messenger RNA biogenesis [BR:npf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LPB400_04785 (hfq)
Chromosome and associated proteins [BR:npf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LPB400_04785 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QXW91330
UniProt: A0ABD7F0H1
LinkDB
Position
1001265..1001561
AA seq 98 aa
MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA
ISTIVPARAVSLQHENKQPQAAAAAAPVQVETVQQPAE
NT seq 297 nt   +upstreamnt  +downstreamnt
atgacagctaaaggacaaatgttacaagatccttttttgaatgcgttgcgtaaagagcac
gttccggtttcaatctacttggtaaacggcatcaagctgcaaggtcaagtggaatcattc
gaccagtacgttgttctgctgcgtaatacttccgtcactcaaatggtttacaaacacgct
atctcaacaatcgttcctgcacgcgcagtcagcctgcaacacgaaaacaaacaacctcaa
gccgctgctgcagctgctccggttcaagttgagactgtgcaacaacctgccgaataa

DBGET integrated database retrieval system