Natronomonas pharaonis: NP_5186A
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Entry
NP_5186A CDS
T00279
Symbol
tfbA8
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nph
Natronomonas pharaonis
Pathway
nph03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NP_5186A (tfbA8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_5186A (tfbA8)
Transcription machinery [BR:
nph03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NP_5186A (tfbA8)
Prokaryotic type
Archaeal type
TFB
NP_5186A (tfbA8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
A2L_zn_ribbon
Zn-ribbon_8
Zn_Tnp_IS1
Sigma70_r4
Cyclin_C
OrfB_Zn_ribbon
LysW-like_globular
GATA
Motif
Other DBs
NCBI-ProteinID:
CAI50684
UniProt:
A0A1U7EZG9
LinkDB
All DBs
Position
complement(2515888..2516865)
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AA seq
325 aa
AA seq
DB search
MTRPTRQRERIRETEGETEDEAEDESAETTCPECSSTDIVKDGDRGELVCNDCGLVVEED
HIDPGPEWRAFNHSERQEKSRVGAPTTQTMHDKGLTTQIDWKDQDAYGRSISSEKRSQMH
RLRKWQERIRTKDAGERNLQFALSEIDRMSSALGVPRSIREVASVIYRRALDDDLIRGRS
IEGVATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMEPVDPQKYV
PRFCSELELSEEVQSKAKDIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVA
EVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcccacccgccaacgggaacgcatccgcgagactgagggggagacggaagac
gaagccgaagacgagtcggcggagacgacgtgtccggagtgttcatcgacggatatcgtc
aaagacggtgataggggcgaactcgtctgcaacgactgtggactcgtcgttgaggaagac
cacatcgacccgggaccggagtggcgtgcgttcaaccattcggaacgacaagaaaagtcc
cgcgtgggcgcgccgacgacccagacgatgcacgacaaggggctgacgacccagatcgac
tggaaggaccaggatgcctatggccggtcgatttcgtcggagaagcgctcccagatgcac
cgactgcggaagtggcaagagcggattcggacaaaagatgcgggcgagcggaacctgcag
ttcgcgctgtctgaaatcgaccggatgtcgtcggcactcggcgtgccgcggtcgatacgg
gaagtagcgtcggtcatctaccgacgcgcgcttgacgacgatttgattcggggccggtcc
atcgagggcgttgccaccgccgccctctatgccgcctgtcgcaaggaaggtatcccgcgc
tctctggaggaaatcagcgaggtctcccgcgtcgaacggaaggaaatcggccgtacctac
cggtatatctcgcaggaactcgggttggaaatggagccagtcgacccacaaaagtacgtg
ccacggttctgctcggaactcgaactgagcgaagaggtccagtcaaaggcaaaagacatc
atcgagacgaccgccgagaagggcctgctttcggggaagtcgccgacaggctacgcggcg
gcggccatctatgcggcgtcgctgctgtgcaatgaaaagaaaacccagcgtgaggtcgcc
gaagtcgcccaggtgaccgaagtaaccatccgcaaccggtatcaagagcagatagaggcg
atgggtatccactcgtga
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