KEGG   Novosphingobium sp. PP1Y: PP1Y_AT14002
Entry
PP1Y_AT14002      CDS       T01515                                 
Name
(GenBank) signal recognition particle subunit SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02024  Quorum sensing
npp03060  Protein export
npp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:npp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PP1Y_AT14002
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP1Y_AT14002
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_AT14002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_AT14002
Enzymes [BR:npp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     PP1Y_AT14002
Secretion system [BR:npp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PP1Y_AT14002
  Eukaryotic Sec-SRP protein
   PP1Y_AT14002
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 AAA_30 AAA_33 AAA_19 ABC_tran Zeta_toxin MMR_HSR1 6PF2K NACHT AAA_16 NB-ARC KAP_NTPase Yuri_gagarin AAA AAA_14 Thymidylate_kin
Other DBs
NCBI-ProteinID: CCA92295
LinkDB
Position
1487739..1489196
AA seq 485 aa
MFDSLSDRLGGVFDKLRGRGALKEQDVRDAMREVRIALLEADVALPVVRRFVDQVTEKAV
GQSVLRSVTPGQQVVKIVNDALVEMLGGDTTPELDLNASPPVVIMMVGLQGSGKTTSTAK
IAKLLKEKHGKKAMMASLDVNRPAAQEQLKVLGEQVGVATLPIIAGQQPTEIATRAMQSA
KLQAIDVLLLDTAGRLHVDQQLMDEMKAVAAISNPRETLLVVDSLTGQDAVNVAQSFSGE
VDLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGTGEKADAIEVFHPSRVANRILGMGD
VVSLVEKAAESVKVEEAEALAKRMEQGKFDMNDLRTQLRQMQNMGGLGMLAGMMPGMKKA
KAAMQQSGMDDKVLLRMDAIIGSMTPKERANPALLNAKRKIRVANGSGTQVQDVNKLLKM
HMEMSKAMKQIKKMGGLKGLAAMFGKGGLDGAMPGLGGKGLGPGAGGLPGLGGAGQPDLS
KFLKK
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgttcgacagcctttccgatcgtctcggcggcgtgttcgacaagctgcgcggtcgcggc
gcgctcaaggagcaggacgttcgcgatgccatgcgcgaagtgcgcatcgcgctgctcgag
gccgacgtcgccctcccggtcgttcgccgattcgtcgatcaggtcactgaaaaggcggta
ggccagtcggtcctgcgctcggtcacgccgggccagcaggtcgtcaagatcgtcaacgac
gccctggtggaaatgctcggcggcgatacgacgccggagctcgacctcaacgcttctccg
ccggtcgtcatcatgatggtcggcctccagggctcgggcaagaccaccagcactgccaag
atcgccaagctgctcaaggagaagcacggcaagaaggcgatgatggcctcgctcgacgtc
aaccgtccggctgcccaggaacagctcaaggttctgggcgagcaggtcggcgttgccaca
ctgccgatcatcgccggacagcagcccaccgagatcgccacccgcgcgatgcagtcggcg
aagctgcaggcgatcgacgtcctcctgctcgacactgccggccgtctccacgtcgaccag
cagctgatggacgagatgaaggcggttgccgccatctcgaacccgcgcgagaccttgctc
gtcgtcgactcgctgaccggccaggacgctgtcaacgtcgcgcagagcttctcgggcgaa
gtggatctgaccggcgtcgtgctgacccgcatggacggcgatgcccgcggcggtgccgcg
ctttcgatgcgcgcggttaccggcaagccgatcaagttcgccggtaccggcgaaaaggcc
gatgcgatcgaggtgttccacccgagccgcgttgccaaccgcatccttggcatgggcgat
gtcgtcagcctcgtcgagaaggccgccgaatcggtcaaggtcgaggaagccgaagcgctg
gccaagcgcatggagcagggcaagttcgacatgaacgacctgcgcacccagctgcgccag
atgcagaacatgggcggtcttggcatgctggccgggatgatgccgggcatgaagaaggcc
aaggcggcgatgcagcagtcgggcatggacgacaaggtcctgctgcgcatggacgcgatc
atcggttcgatgacgcccaaggagcgggcgaatcccgcgctgctcaacgccaagcgcaag
atccgcgtcgccaatggttcgggtacccaggtccaggacgtcaacaagctgctgaaaatg
cacatggagatgtccaaggccatgaagcagatcaagaagatgggcggcctcaaggggctt
gccgcgatgttcggcaagggcggcctcgacggcgccatgccgggtctcggcggcaagggt
ctcggccccggcgcgggcgggttgcccgggctcggcggagccggtcagcccgatctcagc
aagtttttgaagaagtga

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