Novosphingobium sp. PP1Y: PP1Y_AT826
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Entry
PP1Y_AT826 CDS
T01515
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03030
DNA replication
npp03430
Mismatch repair
npp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP1Y_AT826
03430 Mismatch repair
PP1Y_AT826
03440 Homologous recombination
PP1Y_AT826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npp03032
]
PP1Y_AT826
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT826
Enzymes [BR:
npp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP1Y_AT826
DNA replication proteins [BR:
npp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP1Y_AT826
DNA repair and recombination proteins [BR:
npp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP1Y_AT826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
CCA91063
UniProt:
F6IFI8
LinkDB
All DBs
Position
91362..92405
Genome browser
AA seq
347 aa
AA seq
DB search
MKATQKDFAGIASRAARDVRVAFFCGPDESGALDAAHKLVSLLADPGERIELPGAELRRD
PVRLGDEARSNSLFGGTRHIWVRAQGDEAHDAVRNLIEDDVESCPVVIVATGATDKSRTA
KLLINRDDALVAMFYPPDLGAVTGAVRTMANGAGLKMGGELAERIARGAGLDSRIARSEV
EKLALYLDASPETPRPVSAADLDAVGAQTEDDDFSPLVDTVLGGRRNAVASELKRIRELG
MNPVGLLLAFERRTAQLAALNAKLGRGGDVAGLLKAEAGARRIFWKDQPALNEQLRIWRG
PRIERLTAKLVAMHQSLLANSQDAELLLAEGLLEIARTACLTVKQRI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcaacgcagaaagacttcgccgggatcgcttcacgcgcggctcgcgatgtgcgc
gttgcctttttctgcggcccggacgaatccggcgcgctggacgctgcgcacaagctggtc
tctttgctggcggatccgggcgagcggatcgagttgcccggcgcggaactgcgcagggac
ccggtgcgcctgggtgacgaggcccgctccaattcgctgttcggtggaacccgccacatc
tgggtgcgagcgcagggcgacgaggcccatgacgcggtgcgcaacctgatcgaggacgat
gtcgagtcctgcccggtcgtgattgtcgccaccggggcgaccgacaagtcgcgcaccgcg
aagctgctgatcaaccgcgacgatgccctcgtggcgatgttctatccgcccgatctcggc
gccgtgaccggcgctgtgcgcacgatggccaatggcgccggcctcaagatgggcggtgaa
ctggccgagcgcatcgcccgcggcgctggtctcgacagccggattgcccgctccgaagtg
gagaagctggcactctatctcgatgcttcgccggagacgccgcgaccggtctcggccgcc
gatctcgacgccgtgggcgcacagaccgaggacgacgatttctcgcccctggtcgatacc
gtgctcggtgggcgccgtaacgcagttgcaagcgaactgaagcggatccgcgaacttggg
atgaacccggtcggcctgctgcttgccttcgagcgtcggacggcgcagctggccgcgctg
aacgcgaagctgggccgcggcggcgacgttgccgggctcctcaaggccgaagcgggcgcg
cgtcgtatcttctggaaagatcagcccgcgctcaacgaacaattgcgcatctggcgtggt
ccgcgaatcgaacgcctcaccgcgaagcttgttgcaatgcaccagtcgttgctggcgaat
agccaggatgcggaactcctcctggctgaaggactgctcgaaatagccagaaccgcctgt
ctgacggtgaagcagcggatatag
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