Novosphingobium sp. PP1Y: PP1Y_AT866
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Entry
PP1Y_AT866 CDS
T01515
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PP1Y_AT866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npp03400
]
PP1Y_AT866
Enzymes [BR:
npp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PP1Y_AT866
DNA repair and recombination proteins [BR:
npp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PP1Y_AT866
Prokaryotic type
PP1Y_AT866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCA91068
LinkDB
All DBs
Position
95944..96633
Genome browser
AA seq
229 aa
AA seq
DB search
MNATASAQSVPPAWQPVLGEVLESRESRQLIGWLQAQEEAGKRIYPPHGHRLRALELTPL
DAVRVVILGQDPYHGAGQAHGLAFSVPEGVRVPPSLANIYKELASDCGVTAPGHGNLEHW
ARQGVLLLNNALTVEEGQAGSHQKKGWEAITDAAVAAVAAKSEPCVFLLWGNHAQKKASR
VPGLASSHHLVLTAPHPSPLSAHSGFFGCSHFSRANAFLAENGRGTIDW
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaacagcaagcgcgcagtcagtgcccccggcatggcagccggtgctgggcgag
gtgctcgaatcgcgcgaatccagacagttgatcggctggctgcaggctcaggaagaagcc
ggcaagcgaatctatccaccgcacggccatcgcctgcgtgcgctcgaactgacgccgctg
gacgcggtgcgggtcgtgattctcggtcaggacccctatcacggcgcgggccaggcgcac
ggcctggctttctcggtgcccgaaggggtgcgcgtgccgccatcgctggcgaatatctac
aaggagctggcgagcgactgcggcgtcaccgcgccgggtcacggcaacctggagcattgg
gcgcggcagggcgtgctgctgctcaacaatgcgctgaccgtggaggaagggcaggccggc
tcgcaccagaaaaagggctgggaagcgatcaccgatgctgccgtggctgccgtcgccgcc
aagagcgagccatgcgtgttcctgctctggggcaaccatgcgcagaagaaggcgtcgcgg
gtaccgggactggcttcgagtcaccatctcgtgctgacggcgccgcatcccagcccgctg
tcggcgcattccgggttcttcggctgcagccacttcagccgcgccaatgccttccttgcc
gagaacgggcgcgggacgatcgactggtaa
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