Nanorana parkeri (Xizang Plateau frog): 108785413
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Entry
108785413 CDS
T04897
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108785413 (TOPORS)
03036 Chromosome and associated proteins [BR:
npr03036
]
108785413 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npr03037
]
108785413 (TOPORS)
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108785413 (TOPORS)
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108785413 (TOPORS)
UBL E3 ligases
108785413 (TOPORS)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108785413 (TOPORS)
Cilium and associated proteins [BR:
npr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108785413 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
108785413
NCBI-ProteinID:
XP_018409974
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MREKRSRRRRTGRKEESGTTMQSTSTDDFIGASSSKAVSRKSHNKGSPADVSPDSKCPIC
LDRFENISHLDRCLHRFCFKCIKEWAKNKAECPLCKQPFHSIFHSVRAEDDFKEYVLRPT
LNGSFGSPDGQRFRYRTTMTRENQLPSQLPMRTLRSSAHRTFSPTDNGVLFEGYTNRPSR
QRGSNIQQMMRRLASRRQASAEGRAMRQIQEQELVNFRRALYRSGMHVRNIQDGGRYRDI
SAEFFRRNPACLHRLVPWLKRELTVLFGTHGSLVNIVQHIIMSNVTRYDMESRAFLEDLQ
PFLLHRTEHFLHEFINFARCPYNMDAYDQHANYDCPAPSYEEGSESESSVITISPDEVNT
GEPDMPSSSIEVGQSLWDDETPGPSYSTVEQATSSVLTTVDSSDEEPSSSRLDSPHLNTT
TTDVIQSQIIPTDDCIIVGYVKPLAERTPELVELSSDSEPSLCEVKLEQAKKPQETPFTL
YDSSESHRSSSASSQSSDKQSPKIKQKLKTSSDKSHLKKKKEKRPTDASRRWLESRKDEK
DERHSYNEGTSRRRERSLSSDCYSRSSRNKACDGHKKWHTKSKQRTKTREKKHKIWREGK
RSRSRDRSSSWRSRTVSLSSESSRELNGSNLRNRKRSKGRSQSRDNDNIDSYRSTYHWEY
TYYSRNRDREEFQKSYKRHSSGRGDCSRYSISPDYHLQTFSQRKESRKLRETNVDKRNYQ
SRSRSNSRATTACALQTQSDKPGGKRKYKTRHLEPQNKSKCETEVTNGKEEHTQTAQGES
KDNLMAKSSNEPKLKLRKKTRSPSVEIVYEGKCTQDAKRHKKKKKKHKKKRRREQSSPVV
IRIDSDSDTSMRLGVPNSNDVTRPGKSDSVESNVALLSDLPTPSTPVNTIDGDCEAASPY
SKACNLPSVNEYLDSSTDILDGLFFGESLDGQAFLPAHSPTKTSSLLDETAVSGLPISDS
KLEQDRETSTTPPITTASQETIAENPQEMFAQTVCEHLQTMPSIASPPTASEESTEENSQ
VIFAETVCEHLEDMVEHLSPTIL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagaggagcaggcggcggagaacgggaagaaaagaggagtcggggacaacg
atgcaatcaacgtcaacagatgacttcataggagctagcagctctaaagctgtctccagg
aaatcgcacaataaaggatccccagcagatgtttctcctgactcaaagtgtcccatatgt
ctggaccgctttgaaaacatatcacacttggaccgatgtctccacaggttttgctttaaa
tgtataaaggaatgggcaaaaaacaaagcagaatgtcccctatgcaagcagccctttcat
tctatatttcatagtgtccgagccgaagatgatttcaaagaatacgttttgaggcccact
ttaaatggctcttttggtagtccagatgggcagaggtttcgctatcgtactactatgacg
agggaaaatcaattgcccagtcaattgcccatgcgaacattaagatcatctgcacacaga
acgttttcgcctacagacaatggcgttctgtttgagggttatacaaatagaccatctcgt
caaagaggcagcaatattcaacagatgatgagaaggctagcttccaggcggcaagccagt
gcagagggcagggcgatgaggcagattcaagagcaggagctcgtcaacttcaggcgagca
ctttaccgctcaggaatgcatgtcaggaatattcaggatggtggacgctatcgtgatatt
tctgctgagttcttccgcagaaatcctgcttgccttcatcggcttgtgccctggcttaaa
cgggaattgacagtcttatttggcacacacggttcccttgttaacattgtacagcacatc
atcatgagcaacgttactcgatatgacatggaaagtcgagcttttttagaggatttgcag
cctttcttgcttcaccgtacagaacactttcttcacgagttcatcaattttgcccgctgc
ccttataatatggatgcatatgaccaacatgccaactacgattgtcctgcaccctcctat
gaagaaggtagtgaatcagaatcttctgtaattactatatccccagatgaggttaataca
ggggaacctgatatgccttcctcttccattgaagttggacaatctctctgggatgatgaa
acacctggaccttcctactccacagtggagcaggcaactagtagcgtgttaactaccgtg
gatagttcagatgaggaaccttcaagtagtagactggattcccctcatttgaataccact
actactgatgttattcagagccagatcattcctactgatgactgtattatagtaggttat
gttaaaccacttgcagaaagaaccccagaattagttgaactctcttctgattccgaacct
tccctttgtgaagtgaagcttgagcaagcgaaaaagccccaagaaacaccttttacttta
tatgacagtagtgaatcacataggtcttcctctgcttcatctcaatcaagtgataagcaa
tcacccaaaattaagcaaaagcttaaaacatccagcgacaaatctcatttaaaaaagaag
aaagagaaaagaccaacagatgcatctcgaagatggcttgaatccaggaaagatgaaaag
gatgaaagacattcttacaatgaaggcacatcaagacggagggagcgctctttgagctcc
gattgttattctcgttcttctcgaaataaagcctgtgacggtcacaaaaaatggcacact
aaaagcaagcaaagaactaaaactcgagaaaagaagcataaaatttggagggaaggaaag
agatcacgtagtagagacagaagttcatcttggagaagcagaacggtttctttgtcaagc
gaaagctccagagagctaaatggatccaacttgagaaatagaaagcgcagcaaggggagg
tcccaaagtcgtgacaatgacaacatagacagctatcgcagtacttatcattgggagtat
acatattatagcagaaaccgcgatagagaagagtttcagaaatcttataaacgacattca
agtggtagaggcgattgctctagatattccatcagtccagattaccatttacagactttc
tctcaaaggaaagaatcaaggaaactgagagagactaatgttgataagcgcaattatcaa
tcaagaagccgttccaacagtcgcgctactacagcctgtgctctgcaaacccaatctgac
aaaccaggtggtaagaggaaatataaaacccgacatctagaaccacaaaacaaaagcaag
tgtgagacggaagtcaccaatggaaaagaggaacatacgcagaccgctcaaggagagtcc
aaggataatttgatggccaaatcttcaaatgaacctaagctaaaattgaggaaaaagaca
cggagccccagtgtggaaatagtgtacgaagggaaatgcacacaggacgccaaacgccat
aaaaagaaaaagaagaaacacaagaagaaacgcagacgtgaacagagttctccggttgtc
atcaggattgacagtgatagtgacacctcgatgagacttggtgtgccaaatagtaatgat
gttacacggcctggtaaaagtgacagcgtagagtctaatgtggctctgcttagtgacttg
ccaactccctctacacccgtcaacaccatagacggagattgtgaagcagcaagcccttat
tccaaagcttgcaatctgccgtcagttaatgaatatctggatagttccacagacatactt
gatggattattttttggtgaaagtttggacgggcaagccttcctaccagcacacagtcca
actaaaacgtcatctcttcttgatgaaactgcagtgtctgggcttcccatatctgattct
aaattggagcaggacagagagacttctactacaccccctataacaactgcctcacaagaa
actattgctgagaatccacaagagatgtttgctcagactgtctgtgaacatttgcaaacc
atgccttctattgcatcacctccaacagcctctgaggagagtacggaagagaactcccaa
gtcatatttgccgagactgtttgtgaacatttggaagatatggtggaacacctatctcca
acaattttatga
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