Nanorana parkeri (Xizang Plateau frog): 108786659
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Entry
108786659 CDS
T04897
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108786659
04121 Ubiquitin system [BR:
npr04121
]
108786659
Transcription factors [BR:
npr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108786659
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108786659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
108786659
NCBI-ProteinID:
XP_018411497
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MASNLAAAARGKREKVTGVTVTSSKLSMDHFKSKMWNYYTKLGDTCVECKVCKKQFSFHN
STMGMREHLHTVHSSGIPQIREHSELDIPEREGAVKRLKQTLPSNSICTSISEPQTQAIA
NLILEMICSDLHSLSVVEEKGFARLVTFLDPNLELPTPMHLAGMLWHEYNVMKQQLKCCL
QAAPSIVLSIQNWTDNSKRSYLSVTANVIDSNWRFCRYLLETHPVHQGKTEDDDDLGKHL
HSVLVEFGLSSNLVSCVVHDNSPMLSSYFKSFKDTCGWACLCCTAHILQGCIKAGLEVEE
MREALTAVRDLVSYFQEDFKASCFLNSKLEAMNKPRLVLDTETCWVSTLEMCQNLLDLKW
AILSILEEHKVDNLSEQHWKLLQDLVPMLKTIWIATLFLQEEQNASISSLMPCLFAIFNS
VGQSCEANGAIKAAANQIQAEICRHWDMLDEGKLIGNPAVIASFLDPRFKELRFLKPWAR
GDLHERVKNMLLEPCVTNLQWSLTCVTKGSIDTLSPPVQDGTPIGLESIYDLLLGRDPTA
YLPEAHHQLENYIVEPVCKRTTHPLQWWNSNHQRYPALARLARQYLAIPATAVKPETAFG
MLQDPLQIRKAALEPKHMAPILFLHQNKDFLEWNLKAE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaacttggctgccgcagcaagagggaagagagaaaaggtaacaggtgtcaca
gtgacgtcatccaagctgtccatggaccattttaaatccaagatgtggaactattataca
aagctgggagatacctgcgttgaatgcaaagtgtgtaagaagcagttttccttccacaat
agcactatgggtatgagagagcatttgcatactgtgcacagttctggcatccctcaaatt
agggaacattctgaactggacattcctgaacgggagggggcagtcaagagactgaagcaa
acactgccctcaaatagcatttgtacttctatatcagaaccccagacacaagcaattgct
aacctgatattagagatgatctgcagcgacctccattccctttcagtggttgaagagaag
ggttttgcacgtctagttactttcttggatccaaaccttgagcttccgactccaatgcat
ctagctggtatgttatggcacgaatataatgtaatgaaacagcagctcaaatgttgtctt
caggctgccccgtccattgtcctatcgattcagaattggactgacaattctaaaaggtcc
tacctctctgttacagcaaatgttattgacagtaattggagattttgtagatacttattg
gagacgcaccccgttcaccaaggcaagacggaggatgatgacgacctgggaaagcactta
cactctgtgctggtggagtttggcctgtctagtaacctagtgtcctgtgtggttcatgat
aattcacctatgctgtcctcttatttcaaatctttcaaagatacatgtgggtgggcctgc
ctctgctgcactgcccacatcttacagggctgtataaaagcagggctggaggttgaagaa
atgcgagaagctctgactgccgttagagacttggtgagttacttccaagaggacttcaaa
gccagttgctttctaaattccaaactggaagctatgaacaagcccaggctggtgctagat
acagagacgtgttgggtctctacgctggaaatgtgtcagaacttgctggacctcaagtgg
gccatcctttctatcctagaagaacataaggtagataacttgtctgagcagcactggaag
ttgcttcaggatttggtgccaatgctgaagaccatatggattgcaacattgttcctgcaa
gaagaacaaaatgcttctatctcctcactgatgccctgtctctttgctatattcaattct
gttgggcaaagctgtgaagccaacggtgccattaaagctgctgcaaatcaaatacaagct
gagatctgtagacactgggacatgttagatgaaggaaaattaattggcaatccggcagtc
attgcttcgtttctggatcctcgttttaaagagctcagatttcttaaaccatgggcaaga
ggagacctacacgaaagggtcaagaatatgcttttggagccatgtgttaccaacctgcag
tggtctctgacctgtgtaactaaaggcagcatcgacactctcagtcctcctgtccaagat
ggcaccccaattggacttgaaagcatttatgaccttcttctggggagagatccaacagct
tacttacctgaagcccatcaccagctggaaaattatatagtggagcctgtctgtaaacgt
acaactcaccctctccagtggtggaacagtaatcatcagagatatccagcattggcccga
ttagctcgccagtatcttgccatacctgccactgctgtgaaacctgaaaccgcctttggc
atgctacaagacccattacaaatacgaaaggctgctctggagccaaaacatatggctccc
attctgttcttgcaccagaataaagactttctagagtggaatctgaaagcagagtaa
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